NBR_0002110501 (Nippostrongylus brasiliensis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 NBR_0002110501 T312815_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Poxm
M03944_2.00
Drosophila melanogaster
CAVTCAWGCGTGACR

YGTCACGCWTGABTG
SELEX
Nitta et al.(2015)
Poxm_1
0.705 0.705
Poxm
M03945_2.00
Drosophila melanogaster
NYSAWGCRTRACS

SGTYAYGCWTSRN
SELEX
Nitta et al.(2015)
Poxm_2
0.705 0.705
Poxm
M06436_2.00
Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA

TCAYGSNYNDNBKNNNNNN
B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129
0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0002110501-mRNA-1 Paired box 15 92

Links

Other Paired box family TFs
Other Nippostrongylus brasiliensis TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SVUK_0000340101 Strongylus vulgaris SVUK_0000340101 I 0.865
ANCCEY_02265 Ancylostoma ceylanicum ANCCEY_02265 I 0.846
HPLM_0000508801 Haemonchus placei HPLM_0000508801 I 0.846
ACAC_0001249001 Angiostrongylus cantonensis ACAC_0001249001 I 0.846
TELCIR_14257 Teladorsagia circumcincta TELCIR_14257 I 0.833
HPBE_0001739601 Heligmosomoides bakeri HPBE_0001739601 I 0.821
CGOC_0001437301 Cylicostephanus goldi CGOC_0001437301 N 0.821
ANCDUO_05898 Ancylostoma duodenale ANCDUO_05898 I 0.821
DICVIV_10778 Dictyocaulus viviparus DICVIV_10778 I 0.821
NECAME_07382 Necator americanus NECAME_07382 I 0.743
AFUN001734 Anopheles funestus AFUN001734 I 0.705
AMAM000649 Anopheles maculatus AMAM000649 I 0.705
AMEC017516 Anopheles melas AMEC017516 I 0.705
AEPI005638 Anopheles epiroticus AEPI005638 I 0.705
AFAF006072 Anopheles farauti AFAF006072 I 0.705
ASIS022893 Anopheles sinensis ASIS022893 I 0.705
ADIR000995 Anopheles dirus ADIR000995 I 0.705
ASTEI07741 Anopheles stephensi ASTEI07741 I 0.705
AQUA002471 Anopheles quadriannulatus AQUA002471 I 0.705
AMIN005066 Anopheles minimus AMIN005066 I 0.705
AMEM000130 Anopheles merus AMEM000130 I 0.705
ACUA000500 Anopheles culicifacies ACUA000500 I 0.705
GF16668 Drosophila ananassae FBgn0093689 I 0.705
GG17455 Drosophila erecta FBgn0109681 I 0.705
GH17421 Drosophila grimshawi FBgn0124891 I 0.705
GI22750 Drosophila mojavensis FBgn0145477 I 0.705
GA21910 Drosophila pseudoobscura FBgn0081895 I 0.705
Poxm Drosophila melanogaster FBgn0003129 D 0.705
ADAC006866 Anopheles darlingi ADAC006866 I 0.705
AGAP001493 Anopheles gambiae AGAP001493 I 0.705
DAPPUDRAFT_307722 Daphnia pulex DAPPUDRAFT_307722 I 0.705
GL24118 Drosophila persimilis FBgn0161708 I 0.705
GM26349 Drosophila sechellia FBgn0181202 I 0.705
LCUP007799 Lucilia cuprina LCUP007799 I 0.705
AALB006349 Anopheles albimanus AALB006349 I 0.705
AARA001070 Anopheles arabiensis AARA001070 I 0.705
AATE019429 Anopheles atroparvus AATE019429 I 0.705
YQE_12494 Dendroctonus ponderosae YQE_12494 I 0.705
TC008838 Tribolium castaneum TC008838 I 0.705
GJ22751 Drosophila virilis FBgn0209855 I 0.705
GK14101 Drosophila willistoni FBgn0216107 I 0.705
GE24855 Drosophila yakuba FBgn0241954 I 0.705
ACEP27324 Atta cephalotes ACEP27324 I 0.705