CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf10496-processed-gene-0.3
(
Meloidogyne floridensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
snap_masked-nMf.1.1.scaf10496-processed-gene-0.3
T312925_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf10496-processed-gene-0.3-mRNA-1
Paired box
12
84
GHTGVNQLGGVFVNGRPLPDNIRQKIVDFHKEGMRPCDISRQLQVSNGCVSKILSRFMESGTIKPRAIGGFIC
Links
Other
Paired box
family TFs
Other
Meloidogyne floridensis
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ppa-vab-3
Pristionchus pacificus
PPA03442
I
0.795
LOAG_04187
Loa loa
LOAG_04187
N
0.795
L889_g29910
Steinernema feltiae
L889_g29910
I
0.795
L893_g1041
Steinernema glaseri
L893_g1041
I
0.795
EEL_0000889701
Elaeophora elaphi
EEL_0000889701
N
0.795
BTMF_0000869901
Brugia timori
BTMF_0000869901
N
0.795
ALUE_0000749601
Ascaris lumbricoides
ALUE_0000749601
N
0.795
WBGene00241130
Onchocerca volvulus
WBGene00241130
I
0.795
ASU_08112
Ascaris suum
ASU_08112
N
0.795
nAv.1.0.1.g05236
Acanthocheilonema viteae
nAv.1.0.1.g05236
I
0.795
nDi.2.2.2.g03678
Dirofilaria immitis
nDi.2.2.2.g03678
I
0.795
TCLT_0000192601
Thelazia callipaeda
TCLT_0000192601
N
0.795
PEQ_0001140301
Parascaris equorum
PEQ_0001140301
N
0.795
WUBG_13045
Wuchereria bancrofti
WUBG_13045
I
0.795
scaffold478-EXSNAP2012.12
Pristionchus exspectatus
scaffold478-EXSNAP2012.12
I
0.795
OFLC_0001383501
Onchocerca flexuosa
OFLC_0001383501
I
0.795
nOo.2.0.1.g04580
Onchocerca ochengi
nOo.2.0.1.g04580
I
0.795
nLs.2.1.2.g01338
Litomosoides sigmodontis
nLs.2.1.2.g01338
N
0.795
Bm14693
Brugia malayi
Bm14693
I
0.795
L596_g12356
Steinernema carpocapsae
L596_g12356
I
0.795
TELCIR_00311
Teladorsagia circumcincta
TELCIR_00311
I
0.781
EVEC_0000795701
Enterobius vermicularis
EVEC_0000795701
I
0.781
ACOC_0000178201
Angiostrongylus costaricensis
ACOC_0000178201
I
0.781
NECAME_04524
Necator americanus
NECAME_04524
I
0.781
DME_0000186001
Dracunculus medinensis
DME_0000186001
N
0.781
ACAC_0001290301
Angiostrongylus cantonensis
ACAC_0001290301
I
0.781
CBG04481
Caenorhabditis briggsae
CBG04481
I
0.781
ACEP24464
Atta cephalotes
ACEP24464
I
0.740
EFV60539
Trichinella spiralis
EFV60539
I
0.740
pax6b
Gasterosteus aculeatus
ENSGACG00000016030
I
0.740
pax6a
Danio rerio
ENSDARG00000103379
I
0.740
SPU_006786
Strongylocentrotus purpuratus
SPU_006786
I
0.740
Ocbimv22011111m.g
Octopus bimaculoides
Ocbimv22011111m.g
I
0.726
DAPPUDRAFT_122807
Daphnia pulex
DAPPUDRAFT_122807
I
0.726
nRc.2.0.1.g00894
Romanomermis culicivorax
nRc.2.0.1.g00894
I
0.726
Pax6
Mus musculus
ENSMUSG00000027168
D
0.726
nRc.2.0.1.g01878
Romanomermis culicivorax
nRc.2.0.1.g01878
I
0.726
PHUM217120
Pediculus humanus
PHUM217120
I
0.726
BGIBMGA009432
Bombyx mori
BGIBMGA009432
I
0.726
HMEL009702
Heliconius melpomene
HMEL009702
I
0.726
pax6b
Danio rerio
ENSDARG00000045936
I
0.726
BGLB007764
Biomphalaria glabrata
BGLB007764
I
0.726
LDEC008984
Leptinotarsa decemlineata
LDEC008984
I
0.726
CLEC008846
Cimex lectularius
CLEC008846
I
0.726
Cflo_05394--XP_001120031.1_APIME
Camponotus floridanus
Cflo_05394--XP_001120031.1_APIME
I
0.726
YQE_05107
Dendroctonus ponderosae
YQE_05107
I
0.726
RPRC003362
Rhodnius prolixus
RPRC003362
I
0.726
RPRC001429
Rhodnius prolixus
RPRC001429
I
0.726
SVE_0227200
Strongyloides venezuelensis
SVE_0227200
I
0.712
SSTP_0000522800
Strongyloides stercoralis
SSTP_0000522800
I
0.712
KGM_02181
Danaus plexippus
KGM_02181
I
0.712
TMUE_s0017010200
Trichuris muris
TMUE_s0017010200
I
0.712
TELCIR_10899
Teladorsagia circumcincta
TELCIR_10899
I
0.712
HPLM_0000491501
Haemonchus placei
HPLM_0000491501
I
0.712
SPAL_0000372000
Strongyloides papillosus
SPAL_0000372000
I
0.712
ACEP20912
Atta cephalotes
ACEP20912
N
0.712
CapteG166874
Capitella teleta
CapteG166874
I
0.712
NECAME_04629
Necator americanus
NECAME_04629
I
0.712
SINV17241
Solenopsis invicta
SINV17241
I
0.712
HCOI01205400
Haemonchus contortus
HCOI01205400
I
0.712
DICVIV_04707
Dictyocaulus viviparus
DICVIV_04707
I
0.712
D918_03581
Trichuris suis
D918_03581
I
0.712