TELCIR_18859 (Teladorsagia circumcincta)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 TELCIR_18859 T312993_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
egl-38
M02426_2.00
Caenorhabditis elegans
ACCGTGAYCAC

GTGRTCACGGT
PBM
Weirauch et al.(2014)
pTH8981
0.831 0.831
pax-2
M00706_2.00
Caenorhabditis elegans
RMSCRTRACS

SGTYAYGSKY
PBM
Narasimhan et al.(2015)
pTH10794
0.831 0.831
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM

KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.814 0.814
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS

SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.814 0.814
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN

NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.814 0.814
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.797 0.797
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.797 0.797
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.797 0.797
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.797 0.797
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.797 0.797
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.797 0.797
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.797 0.797
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.797 0.797
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.797 0.797
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.797 0.797
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.797 0.797
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.797 0.797
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.797 0.797
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.797 0.797
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.797 0.797
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.797 0.797
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.797 0.797
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.797 0.797
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.797 0.797
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.797 0.797
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN

NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.763 0.763
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM

KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.763 0.763
PAX8
M11205_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.763 0.763
PAX8
M11206_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.763 0.763
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.763 0.763
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_18859 Paired box 1 59

Links

Other Paired box family TFs
Other Teladorsagia circumcincta TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DICVIV_04707 Dictyocaulus viviparus DICVIV_04707 I 1.000
TELCIR_10899 Teladorsagia circumcincta TELCIR_10899 I 1.000
HCOI01205400 Haemonchus contortus HCOI01205400 I 1.000
ANCCAN_01420 Ancylostoma caninum ANCCAN_01420 N 0.983
ANCDUO_11516 Ancylostoma duodenale ANCDUO_11516 I 0.906
EEL_0001009001 Elaeophora elaphi EEL_0001009001 I 0.881
nDi.2.2.2.g01404 Dirofilaria immitis nDi.2.2.2.g01404 I 0.881
ASU_03705 Ascaris suum ASU_03705 I 0.881
nLs.2.1.2.g05197 Litomosoides sigmodontis nLs.2.1.2.g05197 I 0.881
SMUV_0000412301 Syphacia muris SMUV_0000412301 I 0.881
LOAG_00159 Loa loa LOAG_00159 I 0.881
ALUE_0001419501 Ascaris lumbricoides ALUE_0001419501 I 0.881
OFLC_0001261901 Onchocerca flexuosa OFLC_0001261901 I 0.881
Bm1956 Brugia malayi Bm1956 I 0.881
pax-2 Caenorhabditis elegans WBGene00003938 D 0.831
GI14046 Drosophila mojavensis FBgn0136800 I 0.814
GL18401 Drosophila persimilis FBgn0156002 I 0.814
GH23966 Drosophila grimshawi FBgn0131423 I 0.814
AMEC016969 Anopheles melas AMEC016969 I 0.814
ASTEI06196 Anopheles stephensi ASTEI06196 I 0.814
AMIN002123 Anopheles minimus AMIN002123 I 0.814
AMEM003247 Anopheles merus AMEM003247 I 0.814
GJ13730 Drosophila virilis FBgn0200951 I 0.814
GF20618 Drosophila ananassae FBgn0097624 I 0.814
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.814
ADIR000964 Anopheles dirus ADIR000964 I 0.814
ACUA027429 Anopheles culicifacies ACUA027429 I 0.814
ACHR009800 Anopheles christyi ACHR009800 I 0.814
AFAF010901 Anopheles farauti AFAF010901 I 0.814
AFUN011579 Anopheles funestus AFUN011579 I 0.814
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I 0.814
AGAP000057 Anopheles gambiae AGAP000057 I 0.814
MESCA003563 Megaselia scalaris MESCA003563 I 0.814
GK13586 Drosophila willistoni FBgn0215594 I 0.814
ASIS021176 Anopheles sinensis ASIS021176 I 0.814
L898_g18055 Steinernema monticolum L898_g18055 I 0.814
L889_g28670 Steinernema feltiae L889_g28670 I 0.814
L596_g7168 Steinernema carpocapsae L596_g7168 I 0.814
RSKR_0000585500 Rhabditophanes kr3021 RSKR_0000585500 I 0.814
AARA001120 Anopheles arabiensis AARA001120 I 0.812
CJA34444 Caenorhabditis japonica CJA34444 I 0.812
AALB006342 Anopheles albimanus AALB006342 I 0.812
ADAC004542 Anopheles darlingi ADAC004542 I 0.812
Pax-2 Gallus gallus ENSGALG00000005689 I 0.797
SPAL_0000372000 Strongyloides papillosus SPAL_0000372000 I 0.797
pax5.L Xenopus laevis XB-GENE-865318 I 0.797
PAX2 Homo sapiens ENSG00000075891 D 0.797
L892_g26455 Steinernema scapterisci L892_g26455 I 0.797
pax2b Danio rerio ENSDARG00000032578 D 0.797
pax2 Xenopus tropicalis XB-GENE-486801 D 0.797
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.797
SVE_0227200 Strongyloides venezuelensis SVE_0227200 I 0.797
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.797
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.797
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.797
PAX5 Anolis carolinensis ENSACAG00000011646 I 0.797
PTRK_0001603600 Parastrongyloides trichosuri PTRK_0001603600 I 0.797
Pax5 Mus musculus ENSMUSG00000014030 D 0.797
SSTP_0000522800 Strongyloides stercoralis SSTP_0000522800 I 0.797
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I 0.797
pax2.L Xenopus laevis XB-GENE-486805 I 0.797
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.797
PAX5 Homo sapiens ENSG00000196092 D 0.781
GM13025 Drosophila sechellia FBgn0167956 I 0.780
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.780
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.780
ENSPFOG00000019830 Poecilia formosa ENSPFOG00000019830 I 0.780
ENSONIG00000000205 Oreochromis niloticus ENSONIG00000000205 I 0.780
pax8 Gasterosteus aculeatus ENSGACG00000016747 I 0.780
ENSAMXG00000009227 Astyanax mexicanus ENSAMXG00000009227 I 0.780
pax8 Danio rerio ENSDARG00000015879 I 0.780
pax2a Danio rerio ENSDARG00000028148 I 0.780
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.780
pax8 Oryzias latipes ENSORLG00000007225 I 0.780
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.780
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.780
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.780
pax8 Tetraodon nigroviridis ENSTNIG00000009029 I 0.780
Hsal_05017--XP_001122481.1_APIME Harpegnathos saltator Hsal_05017--XP_001122481.1_APIME I 0.763
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.763
ACEP12359 Atta cephalotes ACEP12359 I 0.763
Pax8 Dipodomys ordii ENSDORG00000002606 I 0.763
SINV11533 Solenopsis invicta SINV11533 I 0.763
NV16807 Nasonia vitripennis NV16807 I 0.763
pax8 Xenopus tropicalis XB-GENE-483693 I 0.750
DAPPUDRAFT_311028 Daphnia pulex DAPPUDRAFT_311028 I 0.746
PAX8 Equus caballus ENSECAG00000009244 I 0.746
SPER_0000498301 Spirometra erinaceieuropaei SPER_0000498301 I 0.746
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.746
AMAM018366 Anopheles maculatus AMAM018366 I 0.742
ENSLOCG00000015261 Lepisosteus oculatus ENSLOCG00000015261 I 0.729
D915_05650 Fasciola hepatica D915_05650 N 0.729
AATE007772 Anopheles atroparvus AATE007772 I 0.719
TRE_0001207401 Trichobilharzia regenti TRE_0001207401 I 0.712
HelroG124549 Helobdella robusta HelroG124549 I 0.712
PAX8 Microcebus murinus ENSMICG00000003265 I 0.712
pax2/5/8-b Ciona intestinalis ENSCING00000005977 I 0.712
PAX8 Ochotona princeps ENSOPRG00000012910 I 0.712
PAX8 Pan troglodytes ENSPTRG00000012380 I 0.712
ENSSARG00000014324 Sorex araneus ENSSARG00000014324 I 0.712
LotgiG135549 Lottia gigantea LotgiG135549 I 0.712