CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TELCIR_18859
(
Teladorsagia circumcincta
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
TELCIR_18859
T312993_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
egl-38
M02426_2.00
Caenorhabditis elegans
ACCGTGAYCAC
GTGRTCACGGT
PBM
Weirauch et al.(2014)
pTH8981
0.831
0.831
pax-2
M00706_2.00
Caenorhabditis elegans
RMSCRTRACS
SGTYAYGSKY
PBM
Narasimhan et al.(2015)
pTH10794
0.831
0.831
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.814
0.814
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.814
0.814
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.814
0.814
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR
YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.797
0.797
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN
NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.797
0.797
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.797
0.797
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.797
0.797
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.797
0.797
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.797
0.797
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.797
0.797
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.797
0.797
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.797
0.797
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.797
0.797
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG
CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.797
0.797
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.797
0.797
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.797
0.797
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.797
0.797
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.797
0.797
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.797
0.797
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.797
0.797
PAX5
M11210_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.797
0.797
PAX5
M11211_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.797
0.797
PAX5
M11212_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.797
0.797
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.763
0.763
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.763
0.763
PAX8
M11205_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.763
0.763
PAX8
M11206_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.763
0.763
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.763
0.763
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_18859
Paired box
1
59
VIGGSKPKVATPRVVGCIAAYKRANPTMFAWEIREKLLQERICDPDNVPSVSSINRIVR
Links
Other
Paired box
family TFs
Other
Teladorsagia circumcincta
TFs
101 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DICVIV_04707
Dictyocaulus viviparus
DICVIV_04707
I
1.000
TELCIR_10899
Teladorsagia circumcincta
TELCIR_10899
I
1.000
HCOI01205400
Haemonchus contortus
HCOI01205400
I
1.000
ANCCAN_01420
Ancylostoma caninum
ANCCAN_01420
N
0.983
ANCDUO_11516
Ancylostoma duodenale
ANCDUO_11516
I
0.906
EEL_0001009001
Elaeophora elaphi
EEL_0001009001
I
0.881
nDi.2.2.2.g01404
Dirofilaria immitis
nDi.2.2.2.g01404
I
0.881
ASU_03705
Ascaris suum
ASU_03705
I
0.881
nLs.2.1.2.g05197
Litomosoides sigmodontis
nLs.2.1.2.g05197
I
0.881
SMUV_0000412301
Syphacia muris
SMUV_0000412301
I
0.881
LOAG_00159
Loa loa
LOAG_00159
I
0.881
ALUE_0001419501
Ascaris lumbricoides
ALUE_0001419501
I
0.881
OFLC_0001261901
Onchocerca flexuosa
OFLC_0001261901
I
0.881
Bm1956
Brugia malayi
Bm1956
I
0.881
pax-2
Caenorhabditis elegans
WBGene00003938
D
0.831
GI14046
Drosophila mojavensis
FBgn0136800
I
0.814
GL18401
Drosophila persimilis
FBgn0156002
I
0.814
GH23966
Drosophila grimshawi
FBgn0131423
I
0.814
AMEC016969
Anopheles melas
AMEC016969
I
0.814
ASTEI06196
Anopheles stephensi
ASTEI06196
I
0.814
AMIN002123
Anopheles minimus
AMIN002123
I
0.814
AMEM003247
Anopheles merus
AMEM003247
I
0.814
GJ13730
Drosophila virilis
FBgn0200951
I
0.814
GF20618
Drosophila ananassae
FBgn0097624
I
0.814
spa-sv
Drosophila pseudoobscura
FBgn0249275
I
0.814
ADIR000964
Anopheles dirus
ADIR000964
I
0.814
ACUA027429
Anopheles culicifacies
ACUA027429
I
0.814
ACHR009800
Anopheles christyi
ACHR009800
I
0.814
AFAF010901
Anopheles farauti
AFAF010901
I
0.814
AFUN011579
Anopheles funestus
AFUN011579
I
0.814
LLOJ002076
Lutzomyia longipalpis
LLOJ002076
I
0.814
AGAP000057
Anopheles gambiae
AGAP000057
I
0.814
MESCA003563
Megaselia scalaris
MESCA003563
I
0.814
GK13586
Drosophila willistoni
FBgn0215594
I
0.814
ASIS021176
Anopheles sinensis
ASIS021176
I
0.814
L898_g18055
Steinernema monticolum
L898_g18055
I
0.814
L889_g28670
Steinernema feltiae
L889_g28670
I
0.814
L596_g7168
Steinernema carpocapsae
L596_g7168
I
0.814
RSKR_0000585500
Rhabditophanes kr3021
RSKR_0000585500
I
0.814
AARA001120
Anopheles arabiensis
AARA001120
I
0.812
CJA34444
Caenorhabditis japonica
CJA34444
I
0.812
AALB006342
Anopheles albimanus
AALB006342
I
0.812
ADAC004542
Anopheles darlingi
ADAC004542
I
0.812
Pax-2
Gallus gallus
ENSGALG00000005689
I
0.797
SPAL_0000372000
Strongyloides papillosus
SPAL_0000372000
I
0.797
pax5.L
Xenopus laevis
XB-GENE-865318
I
0.797
PAX2
Homo sapiens
ENSG00000075891
D
0.797
L892_g26455
Steinernema scapterisci
L892_g26455
I
0.797
pax2b
Danio rerio
ENSDARG00000032578
D
0.797
pax2
Xenopus tropicalis
XB-GENE-486801
D
0.797
ENSLACG00000013159
Latimeria chalumnae
ENSLACG00000013159
I
0.797
SVE_0227200
Strongyloides venezuelensis
SVE_0227200
I
0.797
ENSONIG00000016065
Oreochromis niloticus
ENSONIG00000016065
I
0.797
ENSPFOG00000003702
Poecilia formosa
ENSPFOG00000003702
I
0.797
pax5
Tetraodon nigroviridis
ENSTNIG00000005085
I
0.797
PAX5
Anolis carolinensis
ENSACAG00000011646
I
0.797
PTRK_0001603600
Parastrongyloides trichosuri
PTRK_0001603600
I
0.797
Pax5
Mus musculus
ENSMUSG00000014030
D
0.797
SSTP_0000522800
Strongyloides stercoralis
SSTP_0000522800
I
0.797
ENSGMOG00000000463
Gadus morhua
ENSGMOG00000000463
I
0.797
pax2.L
Xenopus laevis
XB-GENE-486805
I
0.797
ENSLOCG00000012825
Lepisosteus oculatus
ENSLOCG00000012825
I
0.797
PAX5
Homo sapiens
ENSG00000196092
D
0.781
GM13025
Drosophila sechellia
FBgn0167956
I
0.780
ENSONIG00000018496
Oreochromis niloticus
ENSONIG00000018496
I
0.780
ENSPFOG00000013202
Poecilia formosa
ENSPFOG00000013202
I
0.780
ENSPFOG00000019830
Poecilia formosa
ENSPFOG00000019830
I
0.780
ENSONIG00000000205
Oreochromis niloticus
ENSONIG00000000205
I
0.780
pax8
Gasterosteus aculeatus
ENSGACG00000016747
I
0.780
ENSAMXG00000009227
Astyanax mexicanus
ENSAMXG00000009227
I
0.780
pax8
Danio rerio
ENSDARG00000015879
I
0.780
pax2a
Danio rerio
ENSDARG00000028148
I
0.780
Pax5
Rattus norvegicus
ENSRNOG00000024729
I
0.780
pax8
Oryzias latipes
ENSORLG00000007225
I
0.780
tetur29g01000
Tetranychus urticae
tetur29g01000
I
0.780
pax2a
Takifugu rubripes
ENSTRUG00000008891
I
0.780
pax2b
Takifugu rubripes
ENSTRUG00000011987
I
0.780
pax8
Tetraodon nigroviridis
ENSTNIG00000009029
I
0.780
Hsal_05017--XP_001122481.1_APIME
Harpegnathos saltator
Hsal_05017--XP_001122481.1_APIME
I
0.763
ENSACAG00000011033
Anolis carolinensis
ENSACAG00000011033
I
0.763
ACEP12359
Atta cephalotes
ACEP12359
I
0.763
Pax8
Dipodomys ordii
ENSDORG00000002606
I
0.763
SINV11533
Solenopsis invicta
SINV11533
I
0.763
NV16807
Nasonia vitripennis
NV16807
I
0.763
pax8
Xenopus tropicalis
XB-GENE-483693
I
0.750
DAPPUDRAFT_311028
Daphnia pulex
DAPPUDRAFT_311028
I
0.746
PAX8
Equus caballus
ENSECAG00000009244
I
0.746
SPER_0000498301
Spirometra erinaceieuropaei
SPER_0000498301
I
0.746
Pax5
Dipodomys ordii
ENSDORG00000015818
I
0.746
AMAM018366
Anopheles maculatus
AMAM018366
I
0.742
ENSLOCG00000015261
Lepisosteus oculatus
ENSLOCG00000015261
I
0.729
D915_05650
Fasciola hepatica
D915_05650
N
0.729
AATE007772
Anopheles atroparvus
AATE007772
I
0.719
TRE_0001207401
Trichobilharzia regenti
TRE_0001207401
I
0.712
HelroG124549
Helobdella robusta
HelroG124549
I
0.712
PAX8
Microcebus murinus
ENSMICG00000003265
I
0.712
pax2/5/8-b
Ciona intestinalis
ENSCING00000005977
I
0.712
PAX8
Ochotona princeps
ENSOPRG00000012910
I
0.712
PAX8
Pan troglodytes
ENSPTRG00000012380
I
0.712
ENSSARG00000014324
Sorex araneus
ENSSARG00000014324
I
0.712
LotgiG135549
Lottia gigantea
LotgiG135549
I
0.712