TTAC_0000709401 (Hydatigera taeniaeformis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 TTAC_0000709401 T313007_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN

NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.712 0.712
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM

KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.712 0.712
PAX8
M11205_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.712 0.712
PAX8
M11206_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.712 0.712
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.712 0.712
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.704 0.704
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.704 0.704
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.704 0.704
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.704 0.704
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.704 0.704
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.704 0.704
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.704 0.704
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.704 0.704
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.704 0.704
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.704 0.704
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.704 0.704
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.704 0.704
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.704 0.704
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.704 0.704
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.704 0.704
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.704 0.704
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.704 0.704
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.704 0.704
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.704 0.704
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTAC_0000709401-mRNA-1 Paired box 19 143

Links

Other Paired box family TFs
Other Hydatigera taeniaeformis TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R002178 Calypte anna Aan_R002178 I 0.704
AATE019182 Anopheles atroparvus AATE019182 I 0.720
ACEP20912 Atta cephalotes ACEP20912 N 0.744
ACEP24464 Atta cephalotes ACEP24464 I 0.776
ACOM023323 Anopheles coluzzii ACOM023323 I 0.728
ACYPI000633 Acyrthosiphon pisum ACYPI000633 I 0.704
Afo_R005136 Aptenodytes forsteri Afo_R005136 I 0.704
Alligator_sinensis_CCG013279.1 Alligator sinensis Alligator_sinensis_CCG013279.1 I 0.704
ALUE_0000749601 Ascaris lumbricoides ALUE_0000749601 N 0.728
ALUE_0001419501 Ascaris lumbricoides ALUE_0001419501 I 0.712
AMAM010937 Anopheles maculatus AMAM010937 I 0.776
ASU_03705 Ascaris suum ASU_03705 I 0.712
A_03128 Schistosoma haematobium A_03128 I 0.848
BGIBMGA009432 Bombyx mori BGIBMGA009432 I 0.768
BGIBMGA013358 Bombyx mori BGIBMGA013358 I 0.710
BGLB007764 Biomphalaria glabrata BGLB007764 I 0.760
Bm14693 Brugia malayi Bm14693 I 0.768
Bm1956 Brugia malayi Bm1956 I 0.712
Brh_R001926 Buceros rhinoceros Brh_R001926 I 0.704
CBG04481 Caenorhabditis briggsae CBG04481 I 0.744
Cflo_05394--XP_001120031.1_APIME Camponotus floridanus Cflo_05394--XP_001120031.1_APIME I 0.752
CLEC008733 Cimex lectularius CLEC008733 I 0.755
CLEC008846 Cimex lectularius CLEC008846 I 0.744
D915_05709 Fasciola hepatica D915_05709 I 0.800
DAPPUDRAFT_122807 Daphnia pulex DAPPUDRAFT_122807 I 0.752
DICVIV_04707 Dictyocaulus viviparus DICVIV_04707 I 0.704
DILT_0000442801 Diphyllobothrium latum DILT_0000442801 I 0.832
DILT_0000606101 Diphyllobothrium latum DILT_0000606101 N 0.720
ECANG7_07793 Echinococcus canadensis ECANG7_07793 I 0.968
ECPE_0000273501 Echinostoma caproni ECPE_0000273501 I 0.784
ECPE_0001376401 Echinostoma caproni ECPE_0001376401 I 0.823
EEL_0000889701 Elaeophora elaphi EEL_0000889701 N 0.704
EEL_0001009001 Elaeophora elaphi EEL_0001009001 I 0.712
EmuJ_000389800 Echinococcus multilocularis EmuJ_000389800 I 0.944
ENSAMEG00000010127 Ailuropoda melanoleuca ENSAMEG00000010127 I 0.704
ENSAMEG00000010662 Ailuropoda melanoleuca ENSAMEG00000010662 I 0.712
ENSAMXG00000009227 Astyanax mexicanus ENSAMXG00000009227 I 0.704
ENSAMXG00000012274 Astyanax mexicanus ENSAMXG00000012274 I 0.704
ENSCSAG00000010751 Chlorocebus sabaeus ENSCSAG00000010751 I 0.704
ENSCSAG00000016682 Chlorocebus sabaeus ENSCSAG00000016682 I 0.712
ENSFALG00000012983 Ficedula albicollis ENSFALG00000012983 I 0.704
ENSGMOG00000011083 Gadus morhua ENSGMOG00000011083 I 0.704
ENSGMOG00000012561 Gadus morhua ENSGMOG00000012561 I 0.712
ENSLACG00000003762 Latimeria chalumnae ENSLACG00000003762 I 0.704
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.704
ENSMEUG00000013983 Macropus eugenii ENSMEUG00000013983 I 0.712
ENSMPUG00000006012 Mustela putorius furo ENSMPUG00000006012 I 0.704
ENSMPUG00000009512 Mustela putorius furo ENSMPUG00000009512 I 0.712
ENSNLEG00000002157 Nomascus leucogenys ENSNLEG00000002157 I 0.712
ENSNLEG00000003664 Nomascus leucogenys ENSNLEG00000003664 I 0.704
ENSOARG00000011518 Ovis aries ENSOARG00000011518 I 0.704
ENSOARG00000020812 Ovis aries ENSOARG00000020812 I 0.712
ENSOGAG00000004773 Otolemur garnettii ENSOGAG00000004773 I 0.704
ENSONIG00000000205 Oreochromis niloticus ENSONIG00000000205 I 0.704
ENSONIG00000008952 Oreochromis niloticus ENSONIG00000008952 I 0.704
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.704
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.712
ENSP00000263334-D1 Bos grunniens ENSP00000263334-D1 I 0.712
ENSP00000350844 Macaca fascicularis ENSP00000350844 I 0.704
ENSP00000350844-D1 Bos grunniens ENSP00000350844-D1 I 0.704
ENSP00000395498 Macaca fascicularis ENSP00000395498 I 0.712
ENSPANG00000016994 Papio anubis ENSPANG00000016994 I 0.712
ENSPANG00000025475 Papio anubis ENSPANG00000025475 I 0.704
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.704
ENSPFOG00000011719 Poecilia formosa ENSPFOG00000011719 I 0.712
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.712
ENSPFOG00000019830 Poecilia formosa ENSPFOG00000019830 I 0.704
ENSPPYG00000012184 Pongo abelii ENSPPYG00000012184 I 0.712
ENSPPYG00000019064 Pongo abelii ENSPPYG00000019064 I 0.704
ENSSHAG00000011845 Sarcophilus harrisii ENSSHAG00000011845 I 0.712
ENSSSCG00000005345 Sus scrofa ENSSSCG00000005345 I 0.704
ENSSSCG00000021332 Sus scrofa ENSSSCG00000021332 I 0.712
ENSSTOG00000024354 Ictidomys tridecemlineatus ENSSTOG00000024354 I 0.704
ENSSTOG00000024664 Ictidomys tridecemlineatus ENSSTOG00000024664 I 0.712
ENSTSYG00000001117 Tarsius syrichta ENSTSYG00000001117 I 0.704
ENSXMAG00000003038 Xiphophorus maculatus ENSXMAG00000003038 I 0.704
ENSXMAG00000012680 Xiphophorus maculatus ENSXMAG00000012680 I 0.712
EVEC_0000795701 Enterobius vermicularis EVEC_0000795701 I 0.736
Gfo_R013093 Geospiza fortis Gfo_R013093 I 0.704
GH23966 Drosophila grimshawi FBgn0131423 I 0.704
GI14046 Drosophila mojavensis FBgn0136800 I 0.704
GJ13730 Drosophila virilis FBgn0200951 I 0.704
GK13586 Drosophila willistoni FBgn0215594 I 0.704
GL18401 Drosophila persimilis FBgn0156002 I 0.704
HCOI01205400 Haemonchus contortus HCOI01205400 I 0.704
HDID_0000853801 Hymenolepis diminuta HDID_0000853801 N 0.856
HMEL009702 Heliconius melpomene HMEL009702 I 0.752
HmN_000735200 Hymenolepis microstoma HmN_000735200 N 0.920
ISCW011634 Ixodes scapularis ISCW011634 I 0.712
KGM_02181 Danaus plexippus KGM_02181 I 0.776
KGM_12316 Danaus plexippus KGM_12316 I 0.704
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.776
L889_g29910 Steinernema feltiae L889_g29910 I 0.768
L893_g1041 Steinernema glaseri L893_g1041 I 0.776
LDEC008984 Leptinotarsa decemlineata LDEC008984 I 0.760
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I 0.712
LOAG_00159 Loa loa LOAG_00159 I 0.712
MCINX012239 Melitaea cinxia MCINX012239 I 0.704
MESCA003563 Megaselia scalaris MESCA003563 I 0.704
Myotis_brandtii_PAX5_10017827 Myotis brandtii Myotis_brandtii_PAX5_10017827 I 0.704
Myotis_brandtii_Pax8_10002304 Myotis brandtii Myotis_brandtii_Pax8_10002304 I 0.712
nAv.1.0.1.g01083 Acanthocheilonema viteae nAv.1.0.1.g01083 I 0.704
nAv.1.0.1.g05236 Acanthocheilonema viteae nAv.1.0.1.g05236 I 0.768
nDi.2.2.2.g01404 Dirofilaria immitis nDi.2.2.2.g01404 I 0.712
nDi.2.2.2.g03678 Dirofilaria immitis nDi.2.2.2.g03678 I 0.768
NECAME_04524 Necator americanus NECAME_04524 I 0.776
NECAME_04629 Necator americanus NECAME_04629 I 0.712
nLs.2.1.2.g05197 Litomosoides sigmodontis nLs.2.1.2.g05197 I 0.712
nOo.2.0.1.g00953 Onchocerca ochengi nOo.2.0.1.g00953 I 0.704
nOo.2.0.1.g04580 Onchocerca ochengi nOo.2.0.1.g04580 I 0.768
nRc.2.0.1.g00894 Romanomermis culicivorax nRc.2.0.1.g00894 I 0.808
nRc.2.0.1.g30341 Romanomermis culicivorax nRc.2.0.1.g30341 I 0.784
Ocbimv22011111m.g Octopus bimaculoides Ocbimv22011111m.g I 0.840
OFLC_0001383501 Onchocerca flexuosa OFLC_0001383501 I 0.704
Pax-2 Gallus gallus ENSGALG00000005689 I 0.704
pax2 Xenopus tropicalis XB-GENE-486801 D 0.704
PAX2 Homo sapiens ENSG00000075891 D 0.704
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.702
pax2.L Xenopus laevis XB-GENE-486805 I 0.704
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.712
pax2a Gasterosteus aculeatus ENSGACG00000008391 I 0.712
pax2a Danio rerio ENSDARG00000028148 I 0.712
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.704
pax2b Gasterosteus aculeatus ENSGACG00000002432 I 0.704
pax2b Danio rerio ENSDARG00000032578 D 0.704
PAX5 Myotis lucifugus ENSMLUG00000012652 I 0.704
PAX5 Canis familiaris ENSCAFG00000002357 I 0.704
PAX5 Pan troglodytes ENSPTRG00000020936 I 0.704
PAX5 Homo sapiens ENSG00000196092 D 0.704
PAX5 Procavia capensis ENSPCAG00000004660 I 0.704
pax5 Oryzias latipes ENSORLG00000005326 I 0.704
PAX5 Ochotona princeps ENSOPRG00000000734 I 0.704
pax5 Gasterosteus aculeatus ENSGACG00000016112 I 0.704
PAX5 Gorilla gorilla ENSGGOG00000003633 I 0.704
PAX5 Oryctolagus cuniculus ENSOCUG00000012281 I 0.704
PAX5 Cavia porcellus ENSCPOG00000009987 I 0.704
PAX5 Monodelphis domestica ENSMODG00000002720 I 0.704
PAX5 Ornithorhynchus anatinus ENSOANG00000007579 I 0.704
PAX5 Loxodonta africana ENSLAFG00000028851 I 0.704
PAX5 Choloepus hoffmanni ENSCHOG00000003521 I 0.704
Pax5 Mus musculus ENSMUSG00000014030 D 0.704
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.704
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.720
PAX5 Felis catus ENSFCAG00000001628 I 0.704
PAX5 Echinops telfairi ENSETEG00000002360 I 0.704
PAX5 Equus caballus ENSECAG00000000551 I 0.704
PAX5 Microcebus murinus ENSMICG00000017679 I 0.704
PAX5 Erinaceus europaeus ENSEEUG00000012531 I 0.704
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.712
PAX5 Bos taurus ENSBTAG00000012498 I 0.704
pax5 Takifugu rubripes ENSTRUG00000003227 I 0.712
PAX5 Pteropus vampyrus ENSPVAG00000000054 I 0.704
PAX5 Taeniopygia guttata ENSTGUG00000007215 I 0.704
pax5 Danio rerio ENSDARG00000037383 I 0.712
Pax5B Gallus gallus ENSGALG00000016431 D 0.704
Pax6 Mus musculus ENSMUSG00000027168 D 0.800
pax6a Danio rerio ENSDARG00000103379 I 0.810
pax6b Danio rerio ENSDARG00000045936 I 0.760
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.824
PAX8 Homo sapiens ENSG00000125618 D 0.712
PAX8 Gorilla gorilla ENSGGOG00000004587 I 0.712
PAX8 Callithrix jacchus ENSCJAG00000013889 I 0.712
PAX8 Cavia porcellus ENSCPOG00000012011 I 0.712
pax8 Xenopus tropicalis XB-GENE-483693 I 0.712
PAX8 Bos taurus ENSBTAG00000019354 I 0.712
PAX8 Erinaceus europaeus ENSEEUG00000003041 I 0.712
PAX8 Loxodonta africana ENSLAFG00000021590 I 0.712
pax8 Danio rerio ENSDARG00000015879 I 0.704
PAX8 Felis catus ENSFCAG00000009580 I 0.704
PAX8 Macaca mulatta ENSMMUG00000011578 I 0.712
PAX8 Monodelphis domestica ENSMODG00000013770 I 0.712
pax8 Takifugu rubripes ENSTRUG00000018667 I 0.704
PAX8 Myotis lucifugus ENSMLUG00000011936 I 0.712
PAX8 Tupaia belangeri ENSTBEG00000008679 I 0.712
Pax8 Rattus norvegicus ENSRNOG00000026203 D 0.712
PAX8 Pteropus vampyrus ENSPVAG00000005666 I 0.712
PAX8 Procavia capensis ENSPCAG00000005498 I 0.712
PAX8 Otolemur garnettii ENSOGAG00000009418 I 0.712
PAX8 Tursiops truncatus ENSTTRG00000011948 I 0.712
Pax8 Mus musculus ENSMUSG00000026976 I 0.712
PAX8 Canis familiaris ENSCAFG00000007309 I 0.712
PAX8 Ornithorhynchus anatinus ENSOANG00000010554 I 0.712
PAX8 Oryctolagus cuniculus ENSOCUG00000004187 I 0.712
pax8.L Xenopus laevis XB-GENE-865008 I 0.704
PEQ_0001140301 Parascaris equorum PEQ_0001140301 N 0.704
PHUM217120 Pediculus humanus PHUM217120 I 0.808
Ppa-vab-3 Pristionchus pacificus PPA03442 I 0.744
Pvit_06595 Pogona vitticeps Pvit_06595 I 0.704
Pvit_15554 Pogona vitticeps Pvit_15554 I 0.704
RPRC001429 Rhodnius prolixus RPRC001429 I 0.760
RPRC003362 Rhodnius prolixus RPRC003362 I 0.752
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I 0.712
scaffold478-EXSNAP2012.12 Pristionchus exspectatus scaffold478-EXSNAP2012.12 I 0.744
SCUD_0000535601 Schistosoma curassoni SCUD_0000535601 I 0.792
SINV17241 Solenopsis invicta SINV17241 I 0.744
Sjc_0004220 Schistosoma japonicum Sjc_0004220 I 0.840
SMUV_0000412301 Syphacia muris SMUV_0000412301 I 0.712
SNAPOd2T00018776001 Oikopleura dioica SNAPOd2T00018776001 I 0.704
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.704
SPER_0000208501 Spirometra erinaceieuropaei SPER_0000208501 N 0.720
SPU_000276 Strongylocentrotus purpuratus SPU_000276 I 0.712
SPU_006786 Strongylocentrotus purpuratus SPU_006786 I 0.744
SPU_014539 Strongylocentrotus purpuratus SPU_014539 I 0.712
SPU_027334 Strongylocentrotus purpuratus SPU_027334 I 0.704
SSLN_0001115101 Schistocephalus solidus SSLN_0001115101 I 0.792
TASK_0000210301 Taenia asiatica TASK_0000210301 I 0.984
TCLT_0000192601 Thelazia callipaeda TCLT_0000192601 N 0.728
TCLT_0000790801 Thelazia callipaeda TCLT_0000790801 I 0.704
TCNE_0000738401 Toxocara canis TCNE_0000738401 I 0.712
TELCIR_00311 Teladorsagia circumcincta TELCIR_00311 I 0.776
TELCIR_10899 Teladorsagia circumcincta TELCIR_10899 I 0.704
TRE_0000921601 Trichobilharzia regenti TRE_0000921601 I 0.800
TsM_000804100 Taenia solium TsM_000804100 I 0.968
WBGene00241130 Onchocerca volvulus WBGene00241130 I 0.768
WBGene00241653 Onchocerca volvulus WBGene00241653 I 0.704
WUBG_13045 Wuchereria bancrofti WUBG_13045 I 0.712
XP_002935920 Xenopus tropicalis XP_002935920 I 0.704
YQE_05107 Dendroctonus ponderosae YQE_05107 I 0.760