BGIBMGA002027 (Bombyx mori)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 BGIBMGA002027 T313245_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BtbVII
M03951_2.00 		Drosophila melanogaster
RKDGBAYATR
YATRTVCHMY		 SELEX
Nitta et al.(2015)
BtbVII_1 		0.800 0.800
BtbVII
M03952_2.00 		Drosophila melanogaster
ATGTAYHWWWGTACAT
ATGTACWWWDRTACAT		 SELEX
Nitta et al.(2015)
BtbVII_2 		0.800 0.800
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA002027-TA Pipsqueak 156 201

Links

Other Pipsqueak family TFs
Other Bombyx mori TFs

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45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action