ENSORLG00000007805 (Oryzias latipes)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSORLG00000007805 T313597_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ENSORLG00000007805
M02435_2.00
Oryzias latipes
SCNAAWNNNN

NNNNWTTNGS
PBM
Weirauch et al.(2014)
pTH9277
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ENSGACG00000007469
M02432_2.00
Gasterosteus aculeatus
NVNMGAWACH

DGTWTCKNBN
PBM
Weirauch et al.(2014)
pTH9179
0.884 0.884
lcorl
M02438_2.00
Xenopus tropicalis
NYCNAAWHN

NDWTTNGRN
PBM
Weirauch et al.(2014)
pTH8558
0.884 0.884
ENSACAG00000012432
M02430_2.00
Anolis carolinensis
NNNCNAAWNN

NNWTTNGNNN
PBM
Weirauch et al.(2014)
pTH9220
0.860 0.860
ENSMGAG00000009953
M02433_2.00
Meleagris gallopavo
NNNYNAAWNN

NNWTTNRNNN
PBM
Weirauch et al.(2014)
pTH8649
0.860 0.860
ENSORLG00000000044
M02434_2.00
Oryzias latipes
CCCAAAWT

AWTTTGGG
PBM
Weirauch et al.(2014)
pTH9275
0.837 0.837
LCORL
M02431_2.00
Choloepus hoffmanni
NNYNAAHNN

NNDTTNRNN
PBM
Weirauch et al.(2014)
pTH9253
0.791 0.791
For this family, TFs with SR scores > 0.778 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02435_2.00 Pipsqueak 51 94

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000009781 Pipsqueak 488 531

Links

Other Pipsqueak family TFs
Other Oryzias latipes TFs

Invalid Input OrderBy

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action