LCORL (Tetraodon nigroviridis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSTNIG00000004634 T313627_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000007285 Pipsqueak 243 281
ENSTNIP00000007285 Pipsqueak 487 532

Links

Other Pipsqueak family TFs
Other Tetraodon nigroviridis TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LCORL Takifugu rubripes ENSTRUG00000013582 N 0.950
LCORL Gasterosteus aculeatus ENSGACG00000016201 N 0.911
ENSONIG00000009039 Oreochromis niloticus ENSONIG00000009039 N 0.902
ENSPFOG00000008607 Poecilia formosa ENSPFOG00000008607 N 0.881
ENSXMAG00000009809 Xiphophorus maculatus ENSXMAG00000009809 N 0.869
ENSGMOG00000016158 Gadus morhua ENSGMOG00000016158 N 0.845