CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTRUG00000008704
(
Takifugu rubripes
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
ENSTRUG00000008704
T313629_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ENSACAG00000012432
M02430_2.00
Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN
PBM
Weirauch et al.(2014)
pTH9220
0.932
0.932
ENSMGAG00000009953
M02433_2.00
Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN
PBM
Weirauch et al.(2014)
pTH8649
0.909
0.909
lcorl
M02438_2.00
Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN
PBM
Weirauch et al.(2014)
pTH8558
0.909
0.909
ENSGACG00000007469
M02432_2.00
Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN
PBM
Weirauch et al.(2014)
pTH9179
0.886
0.886
ENSORLG00000007805
M02435_2.00
Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS
PBM
Weirauch et al.(2014)
pTH9277
0.864
0.864
ENSORLG00000000044
M02434_2.00
Oryzias latipes
CCCAAAWT
AWTTTGGG
PBM
Weirauch et al.(2014)
pTH9275
0.841
0.841
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000021851
Pipsqueak
492
536
TELLEEAIVVVMDGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKN
ENSTRUP00000021852
Pipsqueak
434
478
TELLEEAIVVVMDGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKN
ENSTRUP00000021853
Pipsqueak
363
407
TELLEEAIVVVMDGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKN
Links
Other
Pipsqueak
family TFs
Other
Takifugu rubripes
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy