GH15670 (Drosophila grimshawi)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 FBgn0123141 T313680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bab1
M06440_2.00
Drosophila melanogaster
AAYAWWWATA

TATWAWTRTT
B1H
Zhu et al.(2011)
bab1_FlyReg_FBgn0004870
1.000 1.000
bab1
M06441_2.00
Drosophila melanogaster
KAATTAWATAW

WTATWTAATTM
B1H
Zhu et al.(2011)
bab1_SANGER_5_FBgn0004870
1.000 1.000
bab1
M09690_2.00
Drosophila melanogaster
AHWAYWATAWAHAT

ATDTWTATWRTWDT
Misc
Kulakovskiy et al.(2009)
bab1
1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0149576 Pipsqueak 55 100

Links

Other Pipsqueak family TFs
Other Drosophila grimshawi TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30190.m011006 Ricinus communis 30190.m011006 N 0.000
evm.TU.supercontig_29.102 Carica papaya evm.TU.supercontig_29.102 N 0.000
gene32271-v1.0-hybrid Fragaria vesca gene32271-v1.0-hybrid N 0.000
GLYMA01G42065 Glycine max GLYMA01G42065 N 0.000
GSMUA_Achr8G28860_001 Musa acuminata GSMUA_Achr8G28860_001 N 0.000
MDP0000230416 Malus domestica MDP0000230416 N 0.000
PDK_20s1631911g001 Phoenix dactylifera PDK_20s1631911g001 N 0.000
PGSC0003DMG401012482 Solanum tuberosum PGSC0003DMG401012482 N 0.000
PK14046.1 Cannabis sativa PK14046.1 N 0.000
Pm023575 Prunus mume Pm023575 N 0.000
Solyc08g007470.1 Solanum lycopersicum Solyc08g007470.1 N 0.000
TCM_016057 Theobroma cacao TCM_016057 N 0.000