CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BtbVII
(
Drosophila melanogaster
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
FBgn0263108
T313747_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BtbVII
M03951_2.00
Drosophila melanogaster
RKDGBAYATR
YATRTVCHMY
SELEX
Nitta et al.(2015)
BtbVII_1
(Direct)
(Direct)
BtbVII
M03952_2.00
Drosophila melanogaster
ATGTAYHWWWGTACAT
ATGTACWWWDRTACAT
SELEX
Nitta et al.(2015)
BtbVII_2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0298302
Pipsqueak
562
607
GDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSR
FBpp0298303
Pipsqueak
562
607
GDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSR
FBpp0298305
Pipsqueak
562
607
GDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSR
FBpp0298306
Pipsqueak
562
607
GDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSR
FBpp0303181
Pipsqueak
562
607
GDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSR
FBpp0303182
Pipsqueak
567
612
GDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSR
FBpp0304406
Pipsqueak
566
611
GDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSR
Links
Other
Pipsqueak
family TFs
Other
Drosophila melanogaster
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy