CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GB40871
(
Apis mellifera
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
GB40871
T313768_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bab1
M06440_2.00
Drosophila melanogaster
AAYAWWWATA
TATWAWTRTT
B1H
Zhu et al.(2011)
bab1_FlyReg_FBgn0004870
1.000
1.000
bab1
M06441_2.00
Drosophila melanogaster
KAATTAWATAW
WTATWTAATTM
B1H
Zhu et al.(2011)
bab1_SANGER_5_FBgn0004870
1.000
1.000
bab1
M09690_2.00
Drosophila melanogaster
AHWAYWATAWAHAT
ATDTWTATWRTWDT
Misc
Kulakovskiy et al.(2009)
bab1
1.000
1.000
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GB40871-PA
Pipsqueak
28
73
RPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGP
Links
Other
Pipsqueak
family TFs
Other
Apis mellifera
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy