HMEL008789 (Heliconius melpomene)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 HMEL008789 T313813_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bab1
M06440_2.00
Drosophila melanogaster
AAYAWWWATA

TATWAWTRTT
B1H
Zhu et al.(2011)
bab1_FlyReg_FBgn0004870
1.000 1.000
bab1
M06441_2.00
Drosophila melanogaster
KAATTAWATAW

WTATWTAATTM
B1H
Zhu et al.(2011)
bab1_SANGER_5_FBgn0004870
1.000 1.000
bab1
M09690_2.00
Drosophila melanogaster
AHWAYWATAWAHAT

ATDTWTATWRTWDT
Misc
Kulakovskiy et al.(2009)
bab1
1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HMEL008789-PA Pipsqueak 45 90

Links

Other Pipsqueak family TFs
Other Heliconius melpomene TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R014069 Calypte anna Aan_R014069 I 0.000
Afo_R003945 Aptenodytes forsteri Afo_R003945 I 0.000
B7ZRM8 Xenopus laevis B7ZRM8 I 0.000
B7ZRU9 Xenopus laevis B7ZRU9 I 0.000
Brh_R009954 Buceros rhinoceros Brh_R009954 I 0.000
Cmyd_10009299 Chelonia mydas Cmyd_10009299 I 0.000
MECOM Anolis carolinensis ENSACAG00000015620 I 0.000
ENSAMEG00000002052 Ailuropoda melanoleuca ENSAMEG00000002052 I 0.000
ENSAPLG00000012134 Anas platyrhynchos ENSAPLG00000012134 I 0.000
MECOM Bos taurus ENSBTAG00000005871 I 0.000
MECOM Canis familiaris ENSCAFG00000014621 I 0.000
MECOM Callithrix jacchus ENSCJAG00000002651 I 0.000
MECOM Cavia porcellus ENSCPOG00000013572 I 0.000
ENSCSAG00000012539 Chlorocebus sabaeus ENSCSAG00000012539 I 0.000
MECOM Dasypus novemcinctus ENSDNOG00000007746 I 0.000
MECOM Equus caballus ENSECAG00000020788 I 0.000
ENSFALG00000008636 Ficedula albicollis ENSFALG00000008636 I 0.000
MECOM Felis catus ENSFCAG00000012665 I 0.000
MECOM Homo sapiens ENSG00000085276 D 0.000
ENSGALG00000009437 Gallus gallus ENSGALG00000009437 I 0.000
MECOM Gorilla gorilla ENSGGOG00000013086 I 0.000
ENSLACG00000017233 Latimeria chalumnae ENSLACG00000017233 I 0.000
MECOM Loxodonta africana ENSLAFG00000011479 I 0.000
ENSLOCG00000009557 Lepisosteus oculatus ENSLOCG00000009557 I 0.000
MECOM Meleagris gallopavo ENSMGAG00000010302 I 0.000
MECOM Myotis lucifugus ENSMLUG00000015749 I 0.000
MECOM Macaca mulatta ENSMMUG00000002242 I 0.000
ENSMMUP00000002995 Macaca fascicularis ENSMMUP00000002995 I 0.000
MECOM Monodelphis domestica ENSMODG00000016133 I 0.000
Mecom Mus musculus ENSMUSG00000027684 D 0.000
ENSNLEG00000004964 Nomascus leucogenys ENSNLEG00000004964 I 0.000
MECOM Ornithorhynchus anatinus ENSOANG00000007585 I 0.000
ENSOARG00000000899 Ovis aries ENSOARG00000000899 I 0.000
MECOM Oryctolagus cuniculus ENSOCUG00000010171 I 0.000
MECOM Otolemur garnettii ENSOGAG00000012812 I 0.000
ENSP00000417899-D1 Bos grunniens ENSP00000417899-D1 I 0.000
ENSPANG00000001637 Papio anubis ENSPANG00000001637 I 0.000
ENSPFOG00000011975 Poecilia formosa ENSPFOG00000011975 I 0.000
ENSPPYG00000014277 Pongo abelii ENSPPYG00000014277 I 0.000
ENSPSIG00000004908 Pelodiscus sinensis ENSPSIG00000004908 I 0.000
MECOM Pan troglodytes ENSPTRG00000015601 I 0.000
Mecom Rattus norvegicus ENSRNOG00000012645 I 0.000
ENSSHAG00000017530 Sarcophilus harrisii ENSSHAG00000017530 I 0.000
ENSTGUG00000011015 Taeniopygia guttata ENSTGUG00000011015 I 0.000
MECOM Tursiops truncatus ENSTTRG00000002158 I 0.000
ENSXMAG00000010745 Xiphophorus maculatus ENSXMAG00000010745 I 0.000
Gfo_R004540 Geospiza fortis Gfo_R004540 I 0.000
Myotis_brandtii_MECOM_10024770 Myotis brandtii Myotis_brandtii_MECOM_10024770 I 0.000
Pvit_19180 Pogona vitticeps Pvit_19180 I 0.000
Tal_R005471 Tyto alba Tal_R005471 I 0.000
mecom.S Xenopus laevis XB-GENE-6448217 I 0.000
mecom.L Xenopus laevis XB-GENE-980198 I 0.000