CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pve_contig_1653-fgenesh-gene-0.0
(
Pythium vexans
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
maker-pve_contig_1653-fgenesh-gene-0.0
T313887_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPV00000024007
Pipsqueak
73
115
PDVWEKAIAAVEQQGMSLRAAAKIYGVHFAALHRRVKKRAASG
Links
Other
Pipsqueak
family TFs
Other
Pythium vexans
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo145458
Phytophthora sojae
Physo145458
N
0.886
Phyra78863
Phytophthora ramorum
Phyra78863
N
0.864
fgenesh_scip_prom.28083.11902
Phytophthora lateralis
fgenesh_scip_prom.28083.11902
N
0.860