nasonia_NCBI_hmm1312624 (Nasonia vitripennis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 nasonia_NCBI_hmm1312624 T313940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00		 Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9266		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Eip93F
M06443_2.00 		Drosophila melanogaster
VCHSCCRAAAWT
AWTTTYGGSDGB		 B1H
Zhu et al.(2011)
Eip93F_SANGER_10_FBgn0013948 		0.978 0.978
For this family, TFs with SR scores > 0.778 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02436_2.00 Pipsqueak 51 96

DNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm1312624 Pipsqueak 360 405

Links

Other Pipsqueak family TFs
Other Nasonia vitripennis TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hsal_07289--NP_001011629.1_APIME Harpegnathos saltator Hsal_07289--NP_001011629.1_APIME I 1.000
AMEC013272 Anopheles melas AMEC013272 I 0.978
GE10258 Drosophila yakuba FBgn0228131 I 0.978
Eip93F Drosophila melanogaster FBgn0264490 D 0.978
GD20912 Drosophila simulans FBgn0192370 I 0.978
GM26391 Drosophila sechellia FBgn0181244 I 0.978
ACEP22879 Atta cephalotes ACEP22879 I 0.872
NBR_0000704901 Nippostrongylus brasiliensis NBR_0000704901 I 0.862
HPBE_0000827001 Heligmosomoides bakeri HPBE_0000827001 I 0.862
ACAC_0000538501 Angiostrongylus cantonensis ACAC_0000538501 I 0.862
ASIM_0001367501 Anisakis simplex ASIM_0001367501 I 0.862
nRc.2.0.1.g42873 Romanomermis culicivorax nRc.2.0.1.g42873 I 0.824
OESDEN_18130 Oesophagostomum dentatum OESDEN_18130 I 0.795
OESDEN_18004 Oesophagostomum dentatum OESDEN_18004 I 0.795
ANCDUO_12248 Ancylostoma duodenale ANCDUO_12248 I 0.795
DICVIV_12442 Dictyocaulus viviparus DICVIV_12442 I 0.795