CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YQE_09847
(
Dendroctonus ponderosae
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
YQE_09847
T314409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BtbVII
M03951_2.00
Drosophila melanogaster
RKDGBAYATR
YATRTVCHMY
SELEX
Nitta et al.(2015)
BtbVII_1
0.844
0.844
BtbVII
M03952_2.00
Drosophila melanogaster
ATGTAYHWWWGTACAT
ATGTACWWWDRTACAT
SELEX
Nitta et al.(2015)
BtbVII_2
0.844
0.844
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENN73600
Pipsqueak
361
406
GEENFIKALNAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPNYR
Links
Other
Pipsqueak
family TFs
Other
Dendroctonus ponderosae
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy