Cflo_07901--XP_001120712.1_APIME (Camponotus floridanus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 Cflo_07901--XP_001120712.1_APIME T314425_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BtbVII
M03951_2.00
Drosophila melanogaster
RKDGBAYATR

YATRTVCHMY
SELEX
Nitta et al.(2015)
BtbVII_1
0.844 0.844
BtbVII
M03952_2.00
Drosophila melanogaster
ATGTAYHWWWGTACAT

ATGTACWWWDRTACAT
SELEX
Nitta et al.(2015)
BtbVII_2
0.844 0.844
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_07901--XP_001120712.1_APIME Pipsqueak 380 425

Links

Other Pipsqueak family TFs
Other Camponotus floridanus TFs

Invalid Input OrderBy

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action