CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSP00000371661
(
Macaca fascicularis
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
ENSP00000371661
T314437_2.00
GigaDB (2015-Oct-22)
NCBI Gene Info:
This gene encodes a transcription factor that appears to function in spermatogenesis. Polymorphisms in this gene are associated with measures of skeletal frame size and adult height. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LCORL
M01304_2.00
Homo sapiens
HYNAAWHN
NDWTTNRD
PBM
Lambert et al.(2019)
pTH11267
1.000
1.000
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000371661
Pipsqueak
231
269
DGLLSKALKDIQSGALDINKAGILYGIPQKTLLLHLEAL
ENSP00000371661
Pipsqueak
480
525
DHEIMEEAIAMVMSGKMSVSKAQGIYGVPHSTLEYKVKERSGTLKT
Links
Other
Pipsqueak
family TFs
Other
Macaca fascicularis
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy