Hsal_05361--XP_001120712.1_APIME (Harpegnathos saltator)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 Hsal_05361--XP_001120712.1_APIME T314444_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BtbVII
M03951_2.00
Drosophila melanogaster
RKDGBAYATR

YATRTVCHMY
SELEX
Nitta et al.(2015)
BtbVII_1
0.867 0.867
BtbVII
M03952_2.00
Drosophila melanogaster
ATGTAYHWWWGTACAT

ATGTACWWWDRTACAT
SELEX
Nitta et al.(2015)
BtbVII_2
0.867 0.867
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hsal_05361--XP_001120712.1_APIME Pipsqueak 374 429

Links

Other Pipsqueak family TFs
Other Harpegnathos saltator TFs

Invalid Input OrderBy

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action