CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AMEC013272
(
Anopheles melas
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
AMEC013272
T314915_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Eip93F
M06443_2.00
Drosophila melanogaster
VCHSCCRAAAWT
AWTTTYGGSDGB
B1H
Zhu et al.(2011)
Eip93F_SANGER_10_FBgn0013948
1.000
1.000
nasonia_NCBI_hmm1312624
M02436_2.00
Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN
PBM
Weirauch et al.(2014)
pTH9266
0.978
0.978
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMEC013272-PA
Pipsqueak
301
346
DRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPR
Links
Other
Pipsqueak
family TFs
Other
Anopheles melas
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GM26391
Drosophila sechellia
FBgn0181244
I
1.000
GE10258
Drosophila yakuba
FBgn0228131
I
1.000
Eip93F
Drosophila melanogaster
FBgn0264490
D
1.000
GD20912
Drosophila simulans
FBgn0192370
I
1.000
Hsal_07289--NP_001011629.1_APIME
Harpegnathos saltator
Hsal_07289--NP_001011629.1_APIME
I
0.978
nasonia_NCBI_hmm1312624
Nasonia vitripennis
nasonia_NCBI_hmm1312624
D
0.978
ASIM_0001367501
Anisakis simplex
ASIM_0001367501
I
0.862
nRc.2.0.1.g42873
Romanomermis culicivorax
nRc.2.0.1.g42873
I
0.824