CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000817801
(
Ascaris lumbricoides
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
ALUE_0000817801
T314992_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000817801-mRNA-1
Pipsqueak
188
227
VMSMALMDVLSGDCSLYRAAVKHQIAISTLQNYFENVQRL
ALUE_0000817801-mRNA-1
Pipsqueak
397
438
KDLKEAVEMVIRSRVTVTAAAARTSISTGTIRPYVHEALQLL
Links
Other
Pipsqueak
family TFs
Other
Ascaris lumbricoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_11112
Ascaris suum
ASU_11112
N
1.000