ANCDUO_12249 (Ancylostoma duodenale)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 ANCDUO_12249 T314999_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mbr-1
M00707_2.00 		Caenorhabditis elegans
NRNGGGCCDN
NHGGCCCNYN		 PBM
Narasimhan et al.(2015)
pTH10031 		0.829 0.829
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ANCDUO_12249 Pipsqueak 15 56

Links

Other Pipsqueak family TFs
Other Ancylostoma duodenale TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OESDEN_00123 Oesophagostomum dentatum OESDEN_00123 I 1.000
CGOC_0000231801 Cylicostephanus goldi CGOC_0000231801 I 1.000
ANCDUO_25789 Ancylostoma duodenale ANCDUO_25789 I 1.000
TELCIR_00496 Teladorsagia circumcincta TELCIR_00496 I 1.000
NECAME_06709 Necator americanus NECAME_06709 I 1.000
DICVIV_13091 Dictyocaulus viviparus DICVIV_13091 I 0.976
Ppa-mbr-1 Pristionchus pacificus PPA15862 I 0.857
nRc.2.0.1.g13586 Romanomermis culicivorax nRc.2.0.1.g13586 N 0.854
mbr-1 Caenorhabditis elegans WBGene00011315 D 0.829
PEQ_0000377201 Parascaris equorum PEQ_0000377201 N 0.806