CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0002099901
(
Gongylonema pulchrum
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
GPUH_0002099901
T315041_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0002099901-mRNA-1
Pipsqueak
122
152
SQADLDAAVRDIRCGRLGTRRASVVYGIPRL
Links
Other
Pipsqueak
family TFs
Other
Gongylonema pulchrum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PEQ_0000377201
Parascaris equorum
PEQ_0000377201
N
0.935
nAv.1.0.1.g05922
Acanthocheilonema viteae
nAv.1.0.1.g05922
N
0.931
BTMF_0000345201
Brugia timori
BTMF_0000345201
N
0.853