L898_g31322 (Steinernema monticolum)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 L898_g31322 T315067_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g31322.t1 Pipsqueak 262 306
L898_g31322.t1 Pipsqueak 421 465

Links

Other Pipsqueak family TFs
Other Steinernema monticolum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L892_g27509 Steinernema scapterisci L892_g27509 N 0.977
L596_g5367 Steinernema carpocapsae L596_g5367 N 0.955
L889_g3580 Steinernema feltiae L889_g3580 N 0.955
L893_g31084 Steinernema glaseri L893_g31084 N 0.932
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.807
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.807
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.807
EVEC_0000343001 Enterobius vermicularis EVEC_0000343001 N 0.807
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.795
ASU_08146 Ascaris suum ASU_08146 N 0.795
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.788
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.784
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.784
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.784
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.782
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.782