nOo.2.0.1.g02662 (Onchocerca ochengi)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 nOo.2.0.1.g02662 T315084_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nOo.2.0.1.t02662-RA Pipsqueak 371 413
nOo.2.0.1.t02662-RA Pipsqueak 563 607

Links

Other Pipsqueak family TFs
Other Onchocerca ochengi TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WBGene00242326 Onchocerca volvulus WBGene00242326 N 1.000
Bm5461 Brugia malayi Bm5461 N 0.988
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.988
LOAG_18975 Loa loa LOAG_18975 N 0.988
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.988
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.988
OFLC_0001352601 Onchocerca flexuosa OFLC_0001352601 N 0.945
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.942
ASU_08146 Ascaris suum ASU_08146 N 0.919
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.885
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.884
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.872
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.872
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.872
EVEC_0000343001 Enterobius vermicularis EVEC_0000343001 N 0.860
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.859
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.849
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.839
SMUV_0000352701 Syphacia muris SMUV_0000352701 N 0.837
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.835
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.835
CJA11562 Caenorhabditis japonica CJA11562 N 0.828
CBN10229 Caenorhabditis brenneri CBN10229 N 0.826
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.824
CRE07418 Caenorhabditis remanei CRE07418 N 0.816
CBG04528 Caenorhabditis briggsae CBG04528 N 0.814
L893_g31084 Steinernema glaseri L893_g31084 N 0.807
BXY_1526500 Bursaphelenchus xylophilus BXY_1526500 N 0.802
maker-nMf.1.1.scaf00051-snap-gene-0.15 Meloidogyne floridensis maker-nMf.1.1.scaf00051-snap-gene-0.15 N 0.795
D917_10060 Trichinella nativa D917_10060 N 0.795
EFV59144 Trichinella spiralis EFV59144 N 0.795
L892_g27509 Steinernema scapterisci L892_g27509 N 0.791
L596_g5367 Steinernema carpocapsae L596_g5367 N 0.788
D918_09847 Trichuris suis D918_09847 N 0.786
TTRE_0000470901 Trichuris trichiura TTRE_0000470901 N 0.786
L889_g3580 Steinernema feltiae L889_g3580 N 0.779