CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold11-EXSNAP2012.46
(
Pristionchus exspectatus
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
scaffold11-EXSNAP2012.46
T315120_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold11-EXSNAP2012.46
Pipsqueak
498
541
GKEQLKAALSAVCFGEMTLNAAANKYNIPSSTIHPYVRKAKSRL
scaffold11-EXSNAP2012.46
Pipsqueak
608
651
KQAMFEAVVAVIAEGVTSAAASARTGIPAATIQNYVWKTRNEMG
scaffold11-EXSNAP2012.46
Pipsqueak
710
746
ILAAIMGEMTIRESAVHFKIAPSTVHPYVTRARLALG
scaffold11-EXSNAP2012.46
Pipsqueak
842
878
LAKGIMHVYVDDKSINEACILFKLTHTTLASYVRAIK
Links
Other
Pipsqueak
family TFs
Other
Pristionchus exspectatus
TFs
0 Related TFs
">No related TF found