Al_scaffold_0001_3792 (Arabidopsis lyrata)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 Al_scaffold_0001_3792 T315192_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0001_3792 PLATZ 64 135

Links

Other PLATZ family TFs
Other Arabidopsis lyrata TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT1G43000 Arabidopsis thaliana AT1G43000 N 0.931
Bostr.12302s0015 Boechera stricta Bostr.12302s0015 N 0.875
Carubv10012331m.g Capsella rubella Carubv10012331m.g N 0.847
Cagra.8320s0001 Capsella grandiflora Cagra.8320s0001 N 0.833
Lus10023411.g Linum usitatissimum Lus10023411.g N 0.806
PK14253.1 Cannabis sativa PK14253.1 N 0.792
TCM_034802 Theobroma cacao TCM_034802 N 0.792
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N 0.792
cassava7406.valid.m1 Manihot esculenta cassava7406.valid.m1 N 0.778
Bostr.7128s0691 Boechera stricta Bostr.7128s0691 N 0.778
cassava13654.valid.m1 Manihot esculenta cassava13654.valid.m1 N 0.778
scaffold_102351.1 Arabidopsis lyrata scaffold_102351.1 N 0.778
XM_002306973.1 Populus trichocarpa POPTR_0005s28040 N 0.778
Cagra.7414s0001 Capsella grandiflora Cagra.7414s0001 N 0.778
Carubv10009696m.g Capsella rubella Carubv10009696m.g N 0.778
SapurV1A.0554s0100 Salix purpurea SapurV1A.0554s0100 N 0.778
Thhalv10008598m.g Eutrema salsugineum Thhalv10008598m.g N 0.778
orange1.1g025742m.g Citrus sinensis orange1.1g025742m.g N 0.778
Lus10040292.g Linum usitatissimum Lus10040292.g N 0.778
Ciclev10002292m.g Citrus clementina Ciclev10002292m.g N 0.778
POPTR_0002s00430 Populus trichocarpa POPTR_0002s00430 N 0.778
30170.m013811 Ricinus communis 30170.m013811 N 0.778
Bra025865 Brassica rapa Bra025865 N 0.778
Thhalv10019067m.g Eutrema salsugineum Thhalv10019067m.g N 0.764
MDP0000133008 Malus domestica MDP0000133008 N 0.764
GSMUA_Achr6G36360_001 Musa acuminata GSMUA_Achr6G36360_001 N 0.764
Bo5g030950 Brassica oleracea Bo5g030950 N 0.764
Bostr.20129s0097 Boechera stricta Bostr.20129s0097 N 0.764
Bo6g120700 Brassica oleracea Bo6g120700 N 0.764
Cagra.2281s0027 Capsella grandiflora Cagra.2281s0027 N 0.764
AT1G21000 Arabidopsis thaliana AT1G21000 N 0.764
SapurV1A.0016s0060 Salix purpurea SapurV1A.0016s0060 N 0.764
fgenesh2_kg.2__1947__AT1G76590.1 Arabidopsis lyrata fgenesh2_kg.2__1947__AT1G76590.1 N 0.764
Bra012263 Brassica rapa Bra012263 N 0.764
Bo7g059750 Brassica oleracea Bo7g059750 N 0.764
MDP0000133007 Malus domestica MDP0000133007 N 0.764
Carubv10020852m.g Capsella rubella Carubv10020852m.g N 0.764
Lus10000952.g Linum usitatissimum Lus10000952.g N 0.764
AT1G76590 Arabidopsis thaliana AT1G76590 N 0.764
mgf010773m Mimulus guttatus mgf010773m N 0.764
Lus10002700.g Linum usitatissimum Lus10002700.g N 0.764
mgf004069m Mimulus guttatus mgf004069m N 0.764
Bra016441 Brassica rapa Bra016441 N 0.764
Bra015731 Brassica rapa Bra015731 N 0.764
MDP0000225862 Malus domestica MDP0000225862 N 0.764
PGSC0003DMG400009931 Solanum tuberosum PGSC0003DMG400009931 N 0.750
Eucgr.F01950 Eucalyptus grandis Eucgr.F01950 N 0.750
GSMUA_AchrUn_randomG24560_001 Musa acuminata GSMUA_AchrUn_randomG24560_001 N 0.750
GSMUA_Achr9G12280_001 Musa acuminata GSMUA_Achr9G12280_001 N 0.750
Bo8g070540 Brassica oleracea Bo8g070540 N 0.750
gene29145-v1.0-hybrid Fragaria vesca gene29145-v1.0-hybrid N 0.750
cassava15058.m1 Manihot esculenta cassava15058.m1 N 0.736
GSMUA_Achr7G20650_001 Musa acuminata GSMUA_Achr7G20650_001 N 0.736
Eucgr.F03621 Eucalyptus grandis Eucgr.F03621 N 0.736
Bra003715 Brassica rapa Bra003715 N 0.736
PK29286.1 Cannabis sativa PK29286.1 N 0.736
Bo6g084850 Brassica oleracea Bo6g084850 N 0.736
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.722
Ciclev10030107m.g Citrus clementina Ciclev10030107m.g N 0.722
Aquca_095_00049 Aquilegia coerulea Aquca_095_00049 N 0.722
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.722
Pm022874 Prunus mume Pm022874 N 0.722
OLONG_015674 Oryza longistaminata OLONG_015674 N 0.722
OMERI01G31170 Oryza meridionalis OMERI01G31170 N 0.722
ONIVA06G25330 Oryza nivara ONIVA06G25330 N 0.722
OPUNC06G19460 Oryza punctata OPUNC06G19460 N 0.722
OGLUM06G22610 Oryza glumaepatula OGLUM06G22610 N 0.722
OBART06G21430 Oryza barthii OBART06G21430 N 0.722
LPERR06G17910 Leersia perrieri LPERR06G17910 N 0.722
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.722
OB06G29400 Oryza brachyantha OB06G29400 N 0.722
Pavir.Da00498 Panicum virgatum Pavir.Da00498 N 0.722
ORGLA06G0177200 Oryza glaberrima ORGLA06G0177200 N 0.722
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.722
BGIOSGA023292 Oryza indica BGIOSGA023292 N 0.722
Pavir.Db00732 Panicum virgatum Pavir.Db00732 N 0.722
ORUFI06G22980 Oryza rufipogon ORUFI06G22980 N 0.722
Si007136m.g Setaria italica Si007136m.g N 0.722
OS06G0624900 Oryza sativa OS06G0624900 N 0.722
Sb10g024575 Sorghum bicolor Sb10g024575 N 0.722
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.722
PK01309.1 Cannabis sativa PK01309.1 N 0.708
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.708
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.708
mgf023930m Mimulus guttatus mgf023930m N 0.708
GLYMA12G08810 Glycine max GLYMA12G08810 N 0.708
Traes_7DL_3547B7B9A Triticum aestivum Traes_7DL_3547B7B9A N 0.708
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.708
POPTR_0006s12100 Populus trichocarpa POPTR_0006s12100 N 0.708
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.708
MLOC_59330 Hordeum vulgare MLOC_59330 N 0.708
MTR_4g078170 Medicago truncatula MTR_4g078170 N 0.708
Ca_00735 Cicer arietinum Ca_00735 N 0.708
30078.m002228 Ricinus communis 30078.m002228 N 0.708
Bra021029 Brassica rapa Bra021029 N 0.708
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.708
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N 0.708
BRADI1G35697 Brachypodium distachyon BRADI1G35697 N 0.708
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.708
GLYMA11G01100 Glycine max GLYMA11G01100 N 0.708
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.708
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.708