Bra025003 (Brassica rapa)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 Bra025003 T315281_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra025003.1-P PLATZ 88 160

Links

Other PLATZ family TFs
Other Brassica rapa TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo7g075640 Brassica oleracea Bo7g075640 N 1.000
Thhalv10001013m.g Eutrema salsugineum Thhalv10001013m.g N 0.945
Bo7g105550 Brassica oleracea Bo7g105550 N 0.945
fgenesh2_kg.7__2515__AT4G17900.1 Arabidopsis lyrata fgenesh2_kg.7__2515__AT4G17900.1 N 0.932
Bostr.30275s0258 Boechera stricta Bostr.30275s0258 N 0.932
Thhalv10026159m.g Eutrema salsugineum Thhalv10026159m.g N 0.932
Bra012632 Brassica rapa Bra012632 N 0.932
AT4G17900 Arabidopsis thaliana AT4G17900 N 0.932
Bra013266 Brassica rapa Bra013266 N 0.918
Cagra.3356s0083 Capsella grandiflora Cagra.3356s0083 N 0.918
Carubv10005524m.g Capsella rubella Carubv10005524m.g N 0.918
Bo1g018010 Brassica oleracea Bo1g018010 N 0.904
Bo8g049810 Brassica oleracea Bo8g049810 N 0.890
Bra021029 Brassica rapa Bra021029 N 0.890
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.875
TCM_015701 Theobroma cacao TCM_015701 N 0.875
Gorai.004G184500 Gossypium raimondii Gorai.004G184500 N 0.863
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.861
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.861
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.861
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.861
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.861
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N 0.861
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.861
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.861
Bra017531 Brassica rapa Bra017531 N 0.853
Bra023280 Brassica rapa Bra023280 N 0.849
Bostr.28243s0064 Boechera stricta Bostr.28243s0064 N 0.849
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N 0.849
Bo8g028900 Brassica oleracea Bo8g028900 N 0.849
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N 0.849
Bra035494 Brassica rapa Bra035494 N 0.849
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.847
PGSC0003DMG400017849 Solanum tuberosum PGSC0003DMG400017849 N 0.847
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.847
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.847
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.847
Pm023220 Prunus mume Pm023220 N 0.847
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.847
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.847
Lus10020337.g Linum usitatissimum Lus10020337.g N 0.836
Bo5g049240 Brassica oleracea Bo5g049240 N 0.836
PGSC0003DMG400007670 Solanum tuberosum PGSC0003DMG400007670 N 0.836
Solyc06g061240.2 Solanum lycopersicum Solyc06g061240.2 N 0.836
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N 0.836
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.833
30054.m000824 Ricinus communis 30054.m000824 N 0.833
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.833
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.833
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.833
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.833
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.833
MDP0000553473 Malus domestica MDP0000553473 N 0.833
MDP0000570901 Malus domestica MDP0000570901 N 0.833
TCM_025548 Theobroma cacao TCM_025548 N 0.833
GLYMA01G44430 Glycine max GLYMA01G44430 N 0.833
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.833
GLYMA11G01100 Glycine max GLYMA11G01100 N 0.833
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N 0.822
Solyc08g076860.2 Solanum lycopersicum Solyc08g076860.2 N 0.822
Solyc08g005100.2 Solanum lycopersicum Solyc08g005100.2 N 0.822
scaffold_800157.1 Arabidopsis lyrata scaffold_800157.1 N 0.822
SapurV1A.1141s0070 Salix purpurea SapurV1A.1141s0070 N 0.822
chr1.CM0591.460.nd Lotus japonicus chr1.CM0591.460.nd N 0.822
30073.m002298 Ricinus communis 30073.m002298 N 0.822
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.822
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.822
chr3.CM0127.220.nc Lotus japonicus chr3.CM0127.220.nc N 0.822
mgf002787m Mimulus guttatus mgf002787m N 0.822
SapurV1A.0182s0280 Salix purpurea SapurV1A.0182s0280 N 0.822
mgf006925m Mimulus guttatus mgf006925m N 0.822
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N 0.822
MTR_4g078170 Medicago truncatula MTR_4g078170 N 0.822
cassava13685.valid.m1 Manihot esculenta cassava13685.valid.m1 N 0.822
Ca_12361 Cicer arietinum Ca_12361 N 0.822
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N 0.822
POPTR_0019s07790 Populus trichocarpa POPTR_0019s07790 N 0.822
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.822
GLYMA12G01890 Glycine max GLYMA12G01890 N 0.822
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.819
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.819
Ca_11505 Cicer arietinum Ca_11505 N 0.819
Cla016461 Citrullus lanatus Cla016461 N 0.819
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.819
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.819
OS02G0692700 Oryza sativa OS02G0692700 N 0.819
Ca_11837 Cicer arietinum Ca_11837 N 0.819
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.819
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N 0.819
Gorai.003G056500 Gossypium raimondii Gorai.003G056500 N 0.819
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.819
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.819
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.819
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.819
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.819
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.819
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.819
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.819
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.819
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N 0.819
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.819
cassava22380.valid.m1 Manihot esculenta cassava22380.valid.m1 N 0.819
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.819
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.819
OBART02G28660 Oryza barthii OBART02G28660 N 0.819
OB02G35810 Oryza brachyantha OB02G35810 N 0.819
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.819
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.819
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.819
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.808
PK20928.1 Cannabis sativa PK20928.1 N 0.808
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.808
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.808
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.808
Si017318m.g Setaria italica Si017318m.g N 0.808
evm.TU.supercontig_71.62 Carica papaya evm.TU.supercontig_71.62 N 0.808
Pm022874 Prunus mume Pm022874 N 0.808
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.808
Cla008966 Citrullus lanatus Cla008966 N 0.808
Si010911m.g Setaria italica Si010911m.g N 0.808
TRIUR3_25489 Triticum urartu TRIUR3_25489 N 0.808
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N 0.808
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N 0.808
F775_28196 Aegilops tauschii F775_28196 N 0.808
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.808
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N 0.808
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.808
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.808
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.808
GLYMA11G11640 Glycine max GLYMA11G11640 N 0.808
OBART04G23520 Oryza barthii OBART04G23520 N 0.808
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.808
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.808
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.808
OB04G30420 Oryza brachyantha OB04G30420 N 0.808
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.808
OS04G0591100 Oryza sativa OS04G0591100 N 0.808
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.808
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.808
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.808
POPTR_0013s07610 Populus trichocarpa POPTR_0013s07610 N 0.808
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.808
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.806
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.806
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.806
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.806
VIT_16s0039g01560 Vitis vinifera VIT_16s0039g01560 N 0.806
Gorai.013G184000 Gossypium raimondii Gorai.013G184000 N 0.806
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.795
Carubv10027053m.g Capsella rubella Carubv10027053m.g N 0.795
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.795
Ca_11235 Cicer arietinum Ca_11235 N 0.795
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N 0.795
TRIUR3_30366 Triticum urartu TRIUR3_30366 N 0.795
MDP0000133007 Malus domestica MDP0000133007 N 0.792
MDP0000133008 Malus domestica MDP0000133008 N 0.792
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.792
PGSC0003DMG400009931 Solanum tuberosum PGSC0003DMG400009931 N 0.792
MTR_5g007230 Medicago truncatula MTR_5g007230 N 0.792
MDP0000225862 Malus domestica MDP0000225862 N 0.792
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.792
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N 0.792
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.792
SapurV1A.1628s0020 Salix purpurea SapurV1A.1628s0020 N 0.790
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N 0.781
Cagra.0751s0029 Capsella grandiflora Cagra.0751s0029 N 0.781
PK14253.1 Cannabis sativa PK14253.1 N 0.781
mgf010773m Mimulus guttatus mgf010773m N 0.778
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.778
Lus10000952.g Linum usitatissimum Lus10000952.g N 0.778
Lus10002700.g Linum usitatissimum Lus10002700.g N 0.778
mgf004069m Mimulus guttatus mgf004069m N 0.778
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.778
Bo9g065480 Brassica oleracea Bo9g065480 N 0.778
30170.m013811 Ricinus communis 30170.m013811 N 0.767
SapurV1A.0554s0100 Salix purpurea SapurV1A.0554s0100 N 0.767
POPTR_0002s00430 Populus trichocarpa POPTR_0002s00430 N 0.767
XM_002306973.1 Populus trichocarpa POPTR_0005s28040 N 0.767
orange1.1g025742m.g Citrus sinensis orange1.1g025742m.g N 0.767
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N 0.767
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N 0.767
PK01309.1 Cannabis sativa PK01309.1 N 0.767
Aquca_095_00049 Aquilegia coerulea Aquca_095_00049 N 0.767
cassava7406.valid.m1 Manihot esculenta cassava7406.valid.m1 N 0.767
SapurV1A.0016s0060 Salix purpurea SapurV1A.0016s0060 N 0.764
Thhalv10008598m.g Eutrema salsugineum Thhalv10008598m.g N 0.764
Bra025865 Brassica rapa Bra025865 N 0.764
Bo7g059750 Brassica oleracea Bo7g059750 N 0.753
Bo5g030950 Brassica oleracea Bo5g030950 N 0.753
Bra012263 Brassica rapa Bra012263 N 0.753
AMTR_s00008p00208550 Amborella trichopoda AMTR_s00008p00208550 N 0.753
Ciclev10002292m.g Citrus clementina Ciclev10002292m.g N 0.753
OB10G26540 Oryza brachyantha OB10G26540 N 0.753
TCM_034802 Theobroma cacao TCM_034802 N 0.750
Carubv10009696m.g Capsella rubella Carubv10009696m.g N 0.750
gene29145-v1.0-hybrid Fragaria vesca gene29145-v1.0-hybrid N 0.750
Bostr.7128s0691 Boechera stricta Bostr.7128s0691 N 0.750
Cagra.7414s0001 Capsella grandiflora Cagra.7414s0001 N 0.750
AT1G21000 Arabidopsis thaliana AT1G21000 N 0.750
Lus10040292.g Linum usitatissimum Lus10040292.g N 0.750
scaffold_102351.1 Arabidopsis lyrata scaffold_102351.1 N 0.750
Bra003715 Brassica rapa Bra003715 N 0.750
Bostr.20129s0097 Boechera stricta Bostr.20129s0097 N 0.740
Thhalv10019067m.g Eutrema salsugineum Thhalv10019067m.g N 0.740
Bra015731 Brassica rapa Bra015731 N 0.740
Bra016441 Brassica rapa Bra016441 N 0.740
Bo6g120700 Brassica oleracea Bo6g120700 N 0.740
cassava13654.valid.m1 Manihot esculenta cassava13654.valid.m1 N 0.740
Bo8g070540 Brassica oleracea Bo8g070540 N 0.740
AT1G76590 Arabidopsis thaliana AT1G76590 N 0.740
AT5G46710 Arabidopsis thaliana AT5G46710 N 0.740
Eucgr.F01950 Eucalyptus grandis Eucgr.F01950 N 0.740
Carubv10020852m.g Capsella rubella Carubv10020852m.g N 0.740
Cagra.2281s0027 Capsella grandiflora Cagra.2281s0027 N 0.740
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.736
GSMUA_Achr9G12280_001 Musa acuminata GSMUA_Achr9G12280_001 N 0.736
GSMUA_AchrUn_randomG24560_001 Musa acuminata GSMUA_AchrUn_randomG24560_001 N 0.736
GSMUA_Achr7G20650_001 Musa acuminata GSMUA_Achr7G20650_001 N 0.736
Bo6g084850 Brassica oleracea Bo6g084850 N 0.736
Cucsa.318510 Cucumis sativus Cucsa.318510 N 0.736
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.736
MLOC_59330 Hordeum vulgare MLOC_59330 N 0.736
Eucgr.F03621 Eucalyptus grandis Eucgr.F03621 N 0.726
TCM_022356 Theobroma cacao TCM_022356 N 0.726
Cla010408 Citrullus lanatus Cla010408 N 0.726
cassava15058.m1 Manihot esculenta cassava15058.m1 N 0.726
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.726
fgenesh2_kg.2__1947__AT1G76590.1 Arabidopsis lyrata fgenesh2_kg.2__1947__AT1G76590.1 N 0.726
Lus10023411.g Linum usitatissimum Lus10023411.g N 0.726
ORGLA06G0177200 Oryza glaberrima ORGLA06G0177200 N 0.722
BGIOSGA023292 Oryza indica BGIOSGA023292 N 0.722
OPUNC06G19460 Oryza punctata OPUNC06G19460 N 0.722
TRIUR3_12775 Triticum urartu TRIUR3_12775 N 0.722
OS06G0624900 Oryza sativa OS06G0624900 N 0.722
Traes_7DL_3547B7B9A Triticum aestivum Traes_7DL_3547B7B9A N 0.722
ORUFI06G22980 Oryza rufipogon ORUFI06G22980 N 0.722
PK29286.1 Cannabis sativa PK29286.1 N 0.722
Sb10g024575 Sorghum bicolor Sb10g024575 N 0.722
OMERI01G31170 Oryza meridionalis OMERI01G31170 N 0.722
OBART06G21430 Oryza barthii OBART06G21430 N 0.722
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.722
Pavir.Db00732 Panicum virgatum Pavir.Db00732 N 0.722
mgf023930m Mimulus guttatus mgf023930m N 0.722
OB06G29400 Oryza brachyantha OB06G29400 N 0.722
LPERR06G17910 Leersia perrieri LPERR06G17910 N 0.722
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.722
OGLUM06G22610 Oryza glumaepatula OGLUM06G22610 N 0.722
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.722
OLONG_015674 Oryza longistaminata OLONG_015674 N 0.722
Pavir.Da00498 Panicum virgatum Pavir.Da00498 N 0.722
BRADI1G35697 Brachypodium distachyon BRADI1G35697 N 0.722
ONIVA06G25330 Oryza nivara ONIVA06G25330 N 0.722
Si007136m.g Setaria italica Si007136m.g N 0.722
F775_08136 Aegilops tauschii F775_08136 N 0.722
orange1.1g028382m.g Citrus sinensis orange1.1g028382m.g N 0.712
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.712
Ciclev10012756m.g Citrus clementina Ciclev10012756m.g N 0.712
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.712
Gorai.009G411200 Gossypium raimondii Gorai.009G411200 N 0.712
30078.m002228 Ricinus communis 30078.m002228 N 0.712
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.712
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.708
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N 0.708