POPTR_0001s21990 (Populus trichocarpa)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 POPTR_0001s21990 T315630_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s21990.1 PLATZ 62 135

Links

Other PLATZ family TFs
Other Populus trichocarpa TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cagra.15046s0001 Capsella grandiflora Cagra.15046s0001 N 0.770
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.743
Cucsa.200310 Cucumis sativus Cucsa.200310 N 0.878
cassava9017.m1 Manihot esculenta cassava9017.m1 N 0.838
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.743
cassava28497.m1 Manihot esculenta cassava28497.m1 N 0.905
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.743
cassava15058.m1 Manihot esculenta cassava15058.m1 N 0.824
30078.m002228 Ricinus communis 30078.m002228 N 0.811
30054.m000824 Ricinus communis 30054.m000824 N 0.743
29589.m001281 Ricinus communis 29589.m001281 N 0.905
Pm026291 Prunus mume Pm026291 N 0.797
Pm023220 Prunus mume Pm023220 N 0.703
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.730
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.797
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.716
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.716
Bostr.27991s0138 Boechera stricta Bostr.27991s0138 N 0.770
Bostr.20129s0097 Boechera stricta Bostr.20129s0097 N 0.703
Aquca_019_00150 Aquilegia coerulea Aquca_019_00150 N 0.797
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.838
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.743
mgf023930m Mimulus guttatus mgf023930m N 0.811
mgf013167m Mimulus guttatus mgf013167m N 0.797
mgf006916m Mimulus guttatus mgf006916m N 0.797
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.703
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N 0.703
e_gw1.35.314.1 Physcomitrella patens e_gw1.35.314.1 N 0.703
Pm022874 Prunus mume Pm022874 N 0.730
Pm012470 Prunus mume Pm012470 N 0.797
TRIUR3_27842 Triticum urartu TRIUR3_27842 N 0.703
TRIUR3_25489 Triticum urartu TRIUR3_25489 N 0.730
Traes_7DS_620E0D488 Triticum aestivum Traes_7DS_620E0D488 N 0.770
Traes_7AS_9EA289C71 Triticum aestivum Traes_7AS_9EA289C71 N 0.770
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.730
Traes_3DL_6A5CA5C37 Triticum aestivum Traes_3DL_6A5CA5C37 N 0.703
TRAES3BF035900190CFD_g Triticum aestivum TRAES3BF035900190CFD_g N 0.703
TRAES3BF035900140CFD_g Triticum aestivum TRAES3BF035900140CFD_g N 0.703
Traes_3AL_CF608F443 Triticum aestivum Traes_3AL_CF608F443 N 0.703
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N 0.730
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N 0.730
Traes_1AL_791D3B325 Triticum aestivum Traes_1AL_791D3B325 N 0.716
TRIUR3_30366 Triticum urartu TRIUR3_30366 N 0.716
TRIUR3_34039 Triticum urartu TRIUR3_34039 N 0.784
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.743
Pm001175 Prunus mume Pm001175 N 0.797
Cla018029 Citrullus lanatus Cla018029 N 0.797
Cla016461 Citrullus lanatus Cla016461 N 0.743
Cla008966 Citrullus lanatus Cla008966 N 0.730
Cla001071 Citrullus lanatus Cla001071 N 0.892
Ca_19047 Cicer arietinum Ca_19047 N 0.838
Ca_17446 Cicer arietinum Ca_17446 N 0.851
Ca_12361 Cicer arietinum Ca_12361 N 0.730
Ca_11505 Cicer arietinum Ca_11505 N 0.743
Ca_00735 Cicer arietinum Ca_00735 N 0.797
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N 0.703
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.838
TCM_041560 Theobroma cacao TCM_041560 N 0.878
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.730
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.743
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.743
Pavir.Fb02226 Panicum virgatum Pavir.Fb02226 N 0.784
Pavir.Fa00017 Panicum virgatum Pavir.Fa00017 N 0.784
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.730
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.730
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N 0.838
orange1.1g028382m.g Citrus sinensis orange1.1g028382m.g N 0.770
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.743
MDP0000570901 Malus domestica MDP0000570901 N 0.716
MDP0000553473 Malus domestica MDP0000553473 N 0.716
MDP0000316069 Malus domestica MDP0000316069 N 0.757
Pavir.J05501 Panicum virgatum Pavir.J05501 N 0.703
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N 0.757
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.851
chr3.CM0396.500.nd Lotus japonicus chr3.CM0396.500.nd N 0.743
PK29286.1 Cannabis sativa PK29286.1 N 0.838
PK20928.1 Cannabis sativa PK20928.1 N 0.730
Thhalv10019067m.g Eutrema salsugineum Thhalv10019067m.g N 0.703
Thhalv10017279m.g Eutrema salsugineum Thhalv10017279m.g N 0.784
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N 0.716
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N 0.757
SapurV1A.3839s0010 Salix purpurea SapurV1A.3839s0010 N 0.716
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.730
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.730
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N 0.986
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N 0.946
MDP0000225862 Malus domestica MDP0000225862 N 0.703
MDP0000133008 Malus domestica MDP0000133008 N 0.703
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.811
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.743
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.743
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N 0.784
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N 0.770
Ciclev10030107m.g Citrus clementina Ciclev10030107m.g N 0.838
Ciclev10012756m.g Citrus clementina Ciclev10012756m.g N 0.770
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.743
Carubv10024278m.g Capsella rubella Carubv10024278m.g N 0.770
Carubv10020852m.g Capsella rubella Carubv10020852m.g N 0.703
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.716
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.716
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.865
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.811
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.730
MDP0000133007 Malus domestica MDP0000133007 N 0.703
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.757
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.824
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.757
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.824
Lus10014396.g Linum usitatissimum Lus10014396.g N 0.784
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.730
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.703
Gorai.009G411100 Gossypium raimondii Gorai.009G411100 N 0.838
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.838
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.703
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N 0.878
Cagra.2281s0027 Capsella grandiflora Cagra.2281s0027 N 0.703
LPERR10G15280 Leersia perrieri LPERR10G15280 N 0.703
GRMZM2G094168 Zea mays GRMZM2G094168 N 0.703
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.730
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.716
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.716
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.824
GLYMA13G21140 Glycine max GLYMA13G21140 N 0.838
GLYMA12G08810 Glycine max GLYMA12G08810 N 0.811
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.851
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.743
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.743
GLYMA03G34530 Glycine max GLYMA03G34530 N 0.811
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.730
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.730
GRMZM2G171934 Zea mays GRMZM2G171934 N 0.770
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.730
LPERR08G20370 Leersia perrieri LPERR08G20370 N 0.743
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.730
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.743
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N 0.838
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.703
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N 0.811
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.743
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.730
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.757
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N 0.716
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.743
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.716
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.743
fgenesh2_kg.2__1947__AT1G76590.1 Arabidopsis lyrata fgenesh2_kg.2__1947__AT1G76590.1 N 0.703
Bo6g120700 Brassica oleracea Bo6g120700 N 0.703
Bo5g049240 Brassica oleracea Bo5g049240 N 0.716
Bo4g164920 Brassica oleracea Bo4g164920 N 0.743
Bo4g073120 Brassica oleracea Bo4g073120 N 0.730
BGIOSGA026486 Oryza indica BGIOSGA026486 N 0.730
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.743
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.743
AT2G27930 Arabidopsis thaliana AT2G27930 N 0.757
AT1G76590 Arabidopsis thaliana AT1G76590 N 0.703
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.716
AMTR_s00008p00208550 Amborella trichopoda AMTR_s00008p00208550 N 0.703
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N 0.703
Bo7g059750 Brassica oleracea Bo7g059750 N 0.703
Bo8g028900 Brassica oleracea Bo8g028900 N 0.703
Bo8g070540 Brassica oleracea Bo8g070540 N 0.730
F775_30314 Aegilops tauschii F775_30314 N 0.703
F775_28196 Aegilops tauschii F775_28196 N 0.730
F775_22386 Aegilops tauschii F775_22386 N 0.770
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N 0.730
BRADI3G43000 Brachypodium distachyon BRADI3G43000 N 0.770
Bra035494 Brassica rapa Bra035494 N 0.703
Bra034379 Brassica rapa Bra034379 N 0.757
Bra023280 Brassica rapa Bra023280 N 0.716
Bra016441 Brassica rapa Bra016441 N 0.703
Bra015731 Brassica rapa Bra015731 N 0.703
Bra012263 Brassica rapa Bra012263 N 0.703
Bra011992 Brassica rapa Bra011992 N 0.743
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.716
TCM_022356 Theobroma cacao TCM_022356 N 0.838
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N 0.811
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.973
POPTR_0006s12100 Populus trichocarpa POPTR_0006s12100 N 0.824
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.757
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.743
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N 0.703
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.851
OS08G0560300 Oryza sativa OS08G0560300 N 0.730
OS04G0591100 Oryza sativa OS04G0591100 N 0.743
OS02G0692700 Oryza sativa OS02G0692700 N 0.743
ORUFI08G26100 Oryza rufipogon ORUFI08G26100 N 0.730
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.743
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.730
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.703
PRUPE_ppa011458mg Prunus persica PRUPE_ppa011458mg N 0.797
TCM_015701 Theobroma cacao TCM_015701 N 0.703
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.851
Solyc08g076860.2 Solanum lycopersicum Solyc08g076860.2 N 0.703
Si017318m.g Setaria italica Si017318m.g N 0.730
Si010911m.g Setaria italica Si010911m.g N 0.743
SELMODRAFT_69065 Selaginella moellendorffii SELMODRAFT_69065 N 0.703
SELMODRAFT_69064 Selaginella moellendorffii SELMODRAFT_69064 N 0.703
Sb07g024020 Sorghum bicolor Sb07g024020 N 0.770
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.743
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.730
Sb01g028260 Sorghum bicolor Sb01g028260 N 0.703
PRUPE_ppa011630mg Prunus persica PRUPE_ppa011630mg N 0.797
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.743
ORGLA08G0190300 Oryza glaberrima ORGLA08G0190300 N 0.730
OBART04G23520 Oryza barthii OBART04G23520 N 0.743
OBART02G28660 Oryza barthii OBART02G28660 N 0.743
OB10G26540 Oryza brachyantha OB10G26540 N 0.703
OB08G30470 Oryza brachyantha OB08G30470 N 0.730
OB04G30420 Oryza brachyantha OB04G30420 N 0.743
OB02G35810 Oryza brachyantha OB02G35810 N 0.743
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.743
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.811
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.716
MTR_1g062160 Medicago truncatula MTR_1g062160 N 0.811
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.743
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.716
OBART08G23610 Oryza barthii OBART08G23610 N 0.730
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.743
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.743
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.743
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.743
OPUNC08G21610 Oryza punctata OPUNC08G21610 N 0.743
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.743
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.743
ONIVA08G26670 Oryza nivara ONIVA08G26670 N 0.730
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.743
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.743
OMERI08G18450 Oryza meridionalis OMERI08G18450 N 0.730
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.743
OLONG_020563 Oryza longistaminata OLONG_020563 N 0.730
OGLUM08G25080 Oryza glumaepatula OGLUM08G25080 N 0.730
MLOC_23439 Hordeum vulgare MLOC_23439 N 0.770