29417.m000034 (Ricinus communis)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 29417.m000034 T315859_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29417.m000034 PLATZ 114 185

Links

Other PLATZ family TFs
Other Ricinus communis TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.972
TCM_006017 Theobroma cacao TCM_006017 N 0.958
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.958
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.958
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.944
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.931
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.931
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.931
PK04104.1 Cannabis sativa PK04104.1 N 0.931
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.931
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.917
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.903
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.903
Cla010042 Citrullus lanatus Cla010042 N 0.903
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.903
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.903
Bra038403 Brassica rapa Bra038403 N 0.903
Bo2g121040 Brassica oleracea Bo2g121040 N 0.903
Pm010795 Prunus mume Pm010795 N 0.889
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.889
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.889
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.889
Bra014899 Brassica rapa Bra014899 N 0.889
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.889
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.889
Si018139m.g Setaria italica Si018139m.g N 0.889
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.889
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.889
Bo7g041160 Brassica oleracea Bo7g041160 N 0.889
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.889
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.889
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.889
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.875
OBART02G05520 Oryza barthii OBART02G05520 N 0.875
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.875
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.875
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.875
OS02G0172800 Oryza sativa OS02G0172800 N 0.875
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.875
OB02G14750 Oryza brachyantha OB02G14750 N 0.875
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.875
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N 0.875
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.861
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.861
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.861
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.861
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.861
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.847
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.847
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.847
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.847
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.847
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.847
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.847
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.833
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.833
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.833
MDP0000891068 Malus domestica MDP0000891068 N 0.833
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.833
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.833
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.833
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.833
Cla019628 Citrullus lanatus Cla019628 N 0.833
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.819
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.819
OS06G0666100 Oryza sativa OS06G0666100 N 0.819
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.819
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.819
OBART06G24000 Oryza barthii OBART06G24000 N 0.819
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.819
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.819
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.819
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.819
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.819
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.819
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.806
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.806
MDP0000197021 Malus domestica MDP0000197021 N 0.800
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.792
Lus10038365.g Linum usitatissimum Lus10038365.g N 0.792
mgf021599m Mimulus guttatus mgf021599m N 0.792
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.792
F775_02274 Aegilops tauschii F775_02274 N 0.792
MTR_2g036170 Medicago truncatula MTR_2g036170 N 0.788
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.784
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.778
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.778
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.778
MTR_4g094680 Medicago truncatula MTR_4g094680 N 0.778
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.750
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.750
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.750
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.750
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.736
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.736
30090.m000247 Ricinus communis 30090.m000247 N 0.736
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.736
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.736
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.736
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.736
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.722
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.722
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.722
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.722
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.722
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.722
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.722
OB02G15630 Oryza brachyantha OB02G15630 N 0.722
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.722
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.722
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.722
Si019544m.g Setaria italica Si019544m.g N 0.722
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.722
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.722
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.722
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.722
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.722
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.722
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.722
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.722
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.722
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.722
OS02G0183000 Oryza sativa OS02G0183000 N 0.722
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.722
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.722
Ca_06740 Cicer arietinum Ca_06740 N 0.722
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.722
Aquca_030_00325 Aquilegia coerulea Aquca_030_00325 N 0.722
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.708
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.708
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.708
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.708
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.708
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N 0.708
TCM_038233 Theobroma cacao TCM_038233 N 0.708
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.708
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.708
GLYMA11G17770 Glycine max GLYMA11G17770 N 0.708
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.708
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.708
Pm017841 Prunus mume Pm017841 N 0.708
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.708
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.708
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N 0.708
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.708
Pm027672 Prunus mume Pm027672 N 0.708
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.708
MDP0000639526 Malus domestica MDP0000639526 N 0.708