30090.m000247 (Ricinus communis)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 30090.m000247 T315866_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
30090.m000247 PLATZ 86 157

Links

Other PLATZ family TFs
Other Ricinus communis TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.958
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.750
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.889
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.764
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.708
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.972
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.708
Ca_06740 Cicer arietinum Ca_06740 N 0.972
Pm027672 Prunus mume Pm027672 N 0.944
29417.m000034 Ricinus communis 29417.m000034 N 0.736
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.736
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.931
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.972
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.931
mgf020898m Mimulus guttatus mgf020898m N 0.889
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.917
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.764
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.750
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.931
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.792
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.889
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.764
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N 0.944
Si018139m.g Setaria italica Si018139m.g N 0.792
Si019544m.g Setaria italica Si019544m.g N 0.903
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.972
Solyc12g010470.1 Solanum lycopersicum Solyc12g010470.1 N 0.831
TCM_006017 Theobroma cacao TCM_006017 N 0.708
TCM_038233 Theobroma cacao TCM_038233 N 0.958
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.889
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.764
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.889
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.889
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.736
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N 0.944
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.806
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.792
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.903
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.736
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.750
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.889
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.722
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.972
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.944
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.722
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.958
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.889
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.722
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.819
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.875
orange1.1g042361m.g Citrus sinensis orange1.1g042361m.g N 0.903
MDP0000639526 Malus domestica MDP0000639526 N 0.958
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.736
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N 0.944
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.736
Carubv10015124m.g Capsella rubella Carubv10015124m.g N 0.944
Ciclev10010747m.g Citrus clementina Ciclev10010747m.g N 0.903
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.958
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.944
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.903
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.917
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.958
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.944
Lus10008031.g Linum usitatissimum Lus10008031.g N 0.861
Lus10008814.g Linum usitatissimum Lus10008814.g N 0.875
Lus10038103.g Linum usitatissimum Lus10038103.g N 0.819
Lus10039989.g Linum usitatissimum Lus10039989.g N 0.861
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.792
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.958
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.722
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.889
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.736
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N 0.944
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.736
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.931
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.972
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.722
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.931
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.972
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.792
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.903
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.722
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.903
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.736
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.722
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.764
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.764
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.931
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.722
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.708
AT2G12646 Arabidopsis thaliana AT2G12646 N 0.944
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.903
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.764
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.750
Bo2g121040 Brassica oleracea Bo2g121040 N 0.722
Bo3g087070 Brassica oleracea Bo3g087070 N 0.944
Bo7g041160 Brassica oleracea Bo7g041160 N 0.736
Bo9g022400 Brassica oleracea Bo9g022400 N 0.931
Bra013149 Brassica rapa Bra013149 N 0.944
Bra014899 Brassica rapa Bra014899 N 0.736
Bra037203 Brassica rapa Bra037203 N 0.931
Bra038403 Brassica rapa Bra038403 N 0.722
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.806
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.819
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.750
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.750
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.764
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.750
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.764
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.903
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.750
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.903
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.750
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.764
OS02G0172800 Oryza sativa OS02G0172800 N 0.764
OS02G0183000 Oryza sativa OS02G0183000 N 0.903
OS06G0666100 Oryza sativa OS06G0666100 N 0.750
PGSC0003DMG400007885 Solanum tuberosum PGSC0003DMG400007885 N 0.831
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.708
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.736
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.764
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.792
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.792
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.903
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.764
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.778
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.736
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.903
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.750
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.764
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.889
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.931
OB02G14750 Oryza brachyantha OB02G14750 N 0.764
OB02G15630 Oryza brachyantha OB02G15630 N 0.903
OBART02G05520 Oryza barthii OBART02G05520 N 0.764
OBART06G24000 Oryza barthii OBART06G24000 N 0.750
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.722