cassava40347.m1 (Manihot esculenta)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 cassava40347.m1 T315882_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava40347.m1 PLATZ 57 134

Links

Other PLATZ family TFs
Other Manihot esculenta TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.859
29968.m000644 Ricinus communis 29968.m000644 I 0.846
PK02661.1 Cannabis sativa PK02661.1 I 0.833
MDP0000290118 Malus domestica MDP0000290118 I 0.821
orange1.1g027579m.g Citrus sinensis orange1.1g027579m.g N 0.808
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I 0.808
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.808
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N 0.808
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.808
Pm005894 Prunus mume Pm005894 I 0.808
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.795
Lus10013242.g Linum usitatissimum Lus10013242.g I 0.795
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.782
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I 0.782
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.782
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.782
Cucsa.012070 Cucumis sativus Cucsa.012070 N 0.769
Cla005897 Citrullus lanatus Cla005897 N 0.769
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N 0.769
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.769
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.756
mgf026615m Mimulus guttatus mgf026615m N 0.756
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.756
TCM_011266 Theobroma cacao TCM_011266 I 0.756
Lus10028998.g Linum usitatissimum Lus10028998.g N 0.718
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.705
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.705
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.705
Lus10003680.g Linum usitatissimum Lus10003680.g N 0.705
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.705
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.705