Ciclev10016385m.g (Citrus clementina)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Ciclev10016385m.g T316002_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10016385m PLATZ 71 142

Links

Other PLATZ family TFs
Other Citrus clementina TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 1.000
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.944
29417.m000034 Ricinus communis 29417.m000034 N 0.931
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.931
TCM_006017 Theobroma cacao TCM_006017 N 0.917
PK04104.1 Cannabis sativa PK04104.1 N 0.917
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.917
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.903
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.903
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.875
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.875
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.861
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.847
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.847
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.847
Pm010795 Prunus mume Pm010795 N 0.847
Cla010042 Citrullus lanatus Cla010042 N 0.847
Bra038403 Brassica rapa Bra038403 N 0.847
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.847
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.847
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.847
Bo2g121040 Brassica oleracea Bo2g121040 N 0.847
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.833
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.833
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.833
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N 0.833
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.833
Bra014899 Brassica rapa Bra014899 N 0.833
Bo7g041160 Brassica oleracea Bo7g041160 N 0.833
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.833
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.833
Si018139m.g Setaria italica Si018139m.g N 0.819
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.819
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.819
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.819
OS02G0172800 Oryza sativa OS02G0172800 N 0.806
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.806
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.806
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.806
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.806
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.806
OB02G14750 Oryza brachyantha OB02G14750 N 0.806
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.806
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.806
OBART02G05520 Oryza barthii OBART02G05520 N 0.806
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.806
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.792
Cla019628 Citrullus lanatus Cla019628 N 0.792
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.792
MDP0000891068 Malus domestica MDP0000891068 N 0.792
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.792
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.792
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.792
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.792
MDP0000197021 Malus domestica MDP0000197021 N 0.792
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.792
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.778
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.778
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.778
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.778
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.778
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.778
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.778
Lus10038365.g Linum usitatissimum Lus10038365.g N 0.764
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.764
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.764
mgf021599m Mimulus guttatus mgf021599m N 0.764
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.764
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.764
MTR_4g094680 Medicago truncatula MTR_4g094680 N 0.764
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.764
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.764
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.764
OS06G0666100 Oryza sativa OS06G0666100 N 0.764
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.764
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.764
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.764
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.764
OBART06G24000 Oryza barthii OBART06G24000 N 0.764
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.764
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.764
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.750
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.750
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.750
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.750
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.736
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.736
F775_02274 Aegilops tauschii F775_02274 N 0.736
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.722
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.708
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.708
Aquca_030_00325 Aquilegia coerulea Aquca_030_00325 N 0.708
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.708
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.708