Eucgr.G02080 (Eucalyptus grandis)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Eucgr.G02080 T316025_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G01818
M07247_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT2G01818_col_a
0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G02080.1 PLATZ 168 245

Links

Other PLATZ family TFs
Other Eucalyptus grandis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.885
TCM_011266 Theobroma cacao TCM_011266 I 0.885
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N 0.885
orange1.1g027579m.g Citrus sinensis orange1.1g027579m.g N 0.885
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.885
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.885
29968.m000644 Ricinus communis 29968.m000644 I 0.872
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.859
Cla005897 Citrullus lanatus Cla005897 N 0.846
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.846
Cucsa.012070 Cucumis sativus Cucsa.012070 N 0.846
MDP0000290118 Malus domestica MDP0000290118 I 0.846
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N 0.842
Pm005894 Prunus mume Pm005894 I 0.833
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.833
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.833
PK02661.1 Cannabis sativa PK02661.1 I 0.833
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.821
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.821
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I 0.821
cassava40347.m1 Manihot esculenta cassava40347.m1 N 0.808
Lus10013242.g Linum usitatissimum Lus10013242.g I 0.795
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.782
PGSC0003DMG400029466 Solanum tuberosum PGSC0003DMG400029466 N 0.779
Solyc04g008090.2 Solanum lycopersicum Solyc04g008090.2 N 0.769
mgf026615m Mimulus guttatus mgf026615m N 0.734
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.731
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.731
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.731
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.731
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.731
Bo2g134600 Brassica oleracea Bo2g134600 I 0.718
AT2G01818 Arabidopsis thaliana AT2G01818 D 0.718
Bo7g078820 Brassica oleracea Bo7g078820 I 0.718
Lus10028998.g Linum usitatissimum Lus10028998.g N 0.705