evm.TU.supercontig_2.160 (Carica papaya)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 evm.TU.supercontig_2.160 T316030_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G01818
M07247_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT2G01818_col_a
0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_2.160 PLATZ 67 144

Links

Other PLATZ family TFs
Other Carica papaya TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT3G60670 Arabidopsis thaliana AT3G60670 N 0.000
cassava14439.m1 Manihot esculenta cassava14439.m1 N 0.000
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.000
Bostr.13158s0066 Boechera stricta Bostr.13158s0066 N 0.000
Cagra.6011s0013 Capsella grandiflora Cagra.6011s0013 N 0.000
Carubv10019494m.g Capsella rubella Carubv10019494m.g N 0.000
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.000
evm.TU.supercontig_145.1 Carica papaya evm.TU.supercontig_145.1 N 0.000
Gorai.001G174900 Gossypium raimondii Gorai.001G174900 N 0.000
Gorai.003G169800 Gossypium raimondii Gorai.003G169800 N 0.000
Gorai.004G163500 Gossypium raimondii Gorai.004G163500 N 0.000
Gorai.007G089600 Gossypium raimondii Gorai.007G089600 N 0.000
30174.m008836 Ricinus communis 30174.m008836 N 0.000
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.000
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N 0.000
Bo4g104880 Brassica oleracea Bo4g104880 N 0.000
Bo8g095360 Brassica oleracea Bo8g095360 N 0.000
Bra007550 Brassica rapa Bra007550 N 0.000
Bra014478 Brassica rapa Bra014478 N 0.000
fgenesh2_kg.5__2532__AT3G60670.1 Arabidopsis lyrata fgenesh2_kg.5__2532__AT3G60670.1 N 0.000
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.000
GLYMA11G17770 Glycine max GLYMA11G17770 N 0.000
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.000
TCM_005554 Theobroma cacao TCM_005554 N 0.000
TCM_016018 Theobroma cacao TCM_016018 N 0.000
VIT_00s0233g00100 Vitis vinifera VIT_00s0233g00100 N 0.000
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N 0.000