orange1.1g027579m.g (Citrus sinensis)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 orange1.1g027579m.g T316120_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g027579m PLATZ 68 145

Links

Other PLATZ family TFs
Other Citrus sinensis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29968.m000644 Ricinus communis 29968.m000644 I 0.859
Bo2g134600 Brassica oleracea Bo2g134600 I 0.718
Bo7g078820 Brassica oleracea Bo7g078820 I 0.718
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.731
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.744
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.744
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.859
cassava40347.m1 Manihot esculenta cassava40347.m1 N 0.808
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N 1.000
Cla005897 Citrullus lanatus Cla005897 N 0.808
Cucsa.012070 Cucumis sativus Cucsa.012070 N 0.808
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I 0.885
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.910
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.731
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.872
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.821
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.872
Lus10013242.g Linum usitatissimum Lus10013242.g I 0.795
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.782
MDP0000290118 Malus domestica MDP0000290118 I 0.821
mgf026615m Mimulus guttatus mgf026615m N 0.756
PK02661.1 Cannabis sativa PK02661.1 I 0.833
Pm005894 Prunus mume Pm005894 I 0.821
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.795
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.795
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.821
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I 0.795
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.795
TCM_011266 Theobroma cacao TCM_011266 I 0.885
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.731
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N 0.808