CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa01072
(
Panicum virgatum
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Pavir.Aa01072
T316129_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa01072.1.p
PLATZ
64
134
WKYASCFVVRVDDLRLFDCAGIQSHAVSDHEVVFLNERTARKRSASAENPCAACARPLTSGHDYCSLFCKV
Links
Other
PLATZ
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ab02527
Panicum virgatum
Pavir.Ab02527
N
0.986
Si020009m.g
Setaria italica
Si020009m.g
N
0.930
Traes_6BL_711FBF650
Triticum aestivum
Traes_6BL_711FBF650
N
0.914
Traes_6DL_8AE832015
Triticum aestivum
Traes_6DL_8AE832015
N
0.914
OLONG_002763
Oryza longistaminata
OLONG_002763
N
0.914
OMERI02G26100
Oryza meridionalis
OMERI02G26100
N
0.914
BRADI3G50830
Brachypodium distachyon
BRADI3G50830
N
0.914
OGLUM02G27290
Oryza glumaepatula
OGLUM02G27290
N
0.900
OPUNC02G24430
Oryza punctata
OPUNC02G24430
N
0.900
ORUFI02G28230
Oryza rufipogon
ORUFI02G28230
N
0.900
BGIOSGA005894
Oryza indica
BGIOSGA005894
N
0.900
ONIVA02G29290
Oryza nivara
ONIVA02G29290
N
0.900
Traes_6AL_ECA73A524
Triticum aestivum
Traes_6AL_ECA73A524
N
0.887
GRMZM2G342691
Zea mays
GRMZM2G342691
N
0.886
OB02G34030
Oryza brachyantha
OB02G34030
N
0.831
LPERR02G21780
Leersia perrieri
LPERR02G21780
N
0.775