Pavir.Ab00641 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.Ab00641 T316135_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab00641.1.p PLATZ 125 196
Pavir.Ab00641.2.p PLATZ 125 196
Pavir.Ab00641.3.p PLATZ 124 195
Pavir.Ab00641.4.p PLATZ 124 195

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS02G0183000 Oryza sativa OS02G0183000 N 0.986
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.986
OB02G15630 Oryza brachyantha OB02G15630 N 0.986
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.986
Si019544m.g Setaria italica Si019544m.g N 0.986
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.986
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.986
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.986
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.972
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.972
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.958
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.958
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.958
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.958
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.958
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.958
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.931
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.917
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.903
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.903
30090.m000247 Ricinus communis 30090.m000247 N 0.903
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.903
MDP0000639526 Malus domestica MDP0000639526 N 0.889
Pm027672 Prunus mume Pm027672 N 0.889
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.875
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.875
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.875
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.875
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N 0.875
Ca_06740 Cicer arietinum Ca_06740 N 0.875
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.875
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.875
PK19037.1 Cannabis sativa PK19037.1 N 0.875
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.875
AT2G12646 Arabidopsis thaliana AT2G12646 N 0.875
Carubv10015124m.g Capsella rubella Carubv10015124m.g N 0.875
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N 0.875
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.875
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.875
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.875
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N 0.875
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N 0.875
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.861
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.861
TCM_038233 Theobroma cacao TCM_038233 N 0.861
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.861
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.861
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.861
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.861
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.861
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.847
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.847
Bo3g087070 Brassica oleracea Bo3g087070 N 0.847
Bra013149 Brassica rapa Bra013149 N 0.847
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.847
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.847
Bo9g022400 Brassica oleracea Bo9g022400 N 0.833
orange1.1g042361m.g Citrus sinensis orange1.1g042361m.g N 0.833
Bra037203 Brassica rapa Bra037203 N 0.833
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.833
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.833
Ciclev10010747m.g Citrus clementina Ciclev10010747m.g N 0.833
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.833
Lus10008814.g Linum usitatissimum Lus10008814.g N 0.819
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.819
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.819
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.806
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.806
Lus10039989.g Linum usitatissimum Lus10039989.g N 0.806
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.806
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.792
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.792
mgf020898m Mimulus guttatus mgf020898m N 0.792
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.792
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.778
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.778
Lus10008031.g Linum usitatissimum Lus10008031.g N 0.778
Si018139m.g Setaria italica Si018139m.g N 0.778
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.778
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.778
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.778
OBART06G24000 Oryza barthii OBART06G24000 N 0.764
OB02G14750 Oryza brachyantha OB02G14750 N 0.764
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.764
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.764
OBART02G05520 Oryza barthii OBART02G05520 N 0.764
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.764
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.764
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.764
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.764
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.764
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.764
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.764
OS02G0172800 Oryza sativa OS02G0172800 N 0.764
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.764
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.764
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.764
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.764
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.764
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.764
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.764
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.764
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.764
OS06G0666100 Oryza sativa OS06G0666100 N 0.764
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.761
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.750
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.750
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.750
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.750
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.750
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.750
29417.m000034 Ricinus communis 29417.m000034 N 0.736
Lus10038103.g Linum usitatissimum Lus10038103.g N 0.736
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.736
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.736
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.736
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.736
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.736
Solyc12g010470.1 Solanum lycopersicum Solyc12g010470.1 N 0.732
PGSC0003DMG400007885 Solanum tuberosum PGSC0003DMG400007885 N 0.732
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N 0.722
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.722
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.722
Pm017841 Prunus mume Pm017841 N 0.722
TCM_006017 Theobroma cacao TCM_006017 N 0.722
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.722
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.722
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.722
PK04104.1 Cannabis sativa PK04104.1 N 0.708
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.708
GLYMA11G17770 Glycine max GLYMA11G17770 N 0.708
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.708
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.708
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.708
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.708
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.708
F775_02274 Aegilops tauschii F775_02274 N 0.708
Bra014899 Brassica rapa Bra014899 N 0.708
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.708
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.708
Bo7g041160 Brassica oleracea Bo7g041160 N 0.708