Pavir.Db00476 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.Db00476 T316142_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db00476.1.p PLATZ 59 130

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29417.m000034 Ricinus communis 29417.m000034 N 0.847
30090.m000247 Ricinus communis 30090.m000247 N 0.750
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.750
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.750
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.778
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.736
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.806
AT2G12646 Arabidopsis thaliana AT2G12646 N 0.708
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.736
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.944
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.944
Bo2g121040 Brassica oleracea Bo2g121040 N 0.792
Bo3g087070 Brassica oleracea Bo3g087070 N 0.736
Bo7g041160 Brassica oleracea Bo7g041160 N 0.806
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.806
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N 0.708
Bra013149 Brassica rapa Bra013149 N 0.736
Bra014899 Brassica rapa Bra014899 N 0.806
Bra038403 Brassica rapa Bra038403 N 0.792
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.958
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.944
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.736
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.806
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N 0.708
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.806
Carubv10015124m.g Capsella rubella Carubv10015124m.g N 0.708
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.819
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.736
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.708
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.736
Ca_06740 Cicer arietinum Ca_06740 N 0.736
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.778
Cla010042 Citrullus lanatus Cla010042 N 0.833
Cla019628 Citrullus lanatus Cla019628 N 0.750
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.833
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.736
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.750
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.722
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.736
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.736
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.778
evm.TU.supercontig_29.132 Carica papaya evm.TU.supercontig_29.132 N 0.722
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.736
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.722
F775_02274 Aegilops tauschii F775_02274 N 0.889
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.806
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N 0.708
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N 0.764
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.764
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.792
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.778
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.722
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.736
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.792
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.722
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.736
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.708
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N 0.722
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.722
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.708
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.917
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.736
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.722
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.750
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.875
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.861
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.750
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.736
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.917
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.917
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.764
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.903
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.931
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.778
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.861
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.736
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.944
Lus10008031.g Linum usitatissimum Lus10008031.g N 0.708
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.716
Lus10038365.g Linum usitatissimum Lus10038365.g N 0.722
MDP0000197021 Malus domestica MDP0000197021 N 0.720
MDP0000639526 Malus domestica MDP0000639526 N 0.722
MDP0000891068 Malus domestica MDP0000891068 N 0.764
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.958
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.736
MTR_4g094680 Medicago truncatula MTR_4g094680 N 0.708
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.722
OB02G14750 Oryza brachyantha OB02G14750 N 0.972
OB02G15630 Oryza brachyantha OB02G15630 N 0.736
OBART02G05520 Oryza barthii OBART02G05520 N 0.944
OBART06G24000 Oryza barthii OBART06G24000 N 0.944
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.944
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.931
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.944
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.944
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.944
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.944
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.972
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.736
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.944
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.778
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.736
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.944
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.944
OS02G0172800 Oryza sativa OS02G0172800 N 0.944
OS02G0183000 Oryza sativa OS02G0183000 N 0.736
OS06G0666100 Oryza sativa OS06G0666100 N 0.944
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.931
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.931
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.750
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.972
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.750
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.736
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.722
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.931
PK04104.1 Cannabis sativa PK04104.1 N 0.806
Pm010795 Prunus mume Pm010795 N 0.792
Pm027672 Prunus mume Pm027672 N 0.722
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.806
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.819
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.722
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.722
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.708
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.792
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.792
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.792
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.736
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.722
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.917
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.722
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.972
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N 0.708
Si018139m.g Setaria italica Si018139m.g N 0.931
Si019544m.g Setaria italica Si019544m.g N 0.736
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.750
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.764
TCM_006017 Theobroma cacao TCM_006017 N 0.806
TCM_016018 Theobroma cacao TCM_016018 N 0.708
TCM_038233 Theobroma cacao TCM_038233 N 0.722
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.792
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.722
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.736
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.958
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.736
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.736
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.944
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.972
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.986
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.736
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.889
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.986
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.778
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.736