SapurV1A.0015s0650 (Salix purpurea)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 SapurV1A.0015s0650 T316162_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G01818
M07247_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT2G01818_col_a
0.756 0.756
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0015s0650.1.p PLATZ 65 142
SapurV1A.0015s0650.2.p PLATZ 13 90
SapurV1A.0015s0650.3.p PLATZ 13 90
SapurV1A.0015s0650.4.p PLATZ 13 90
SapurV1A.0015s0650.5.p PLATZ 13 90
SapurV1A.0015s0650.6.p PLATZ 1 55

Links

Other PLATZ family TFs
Other Salix purpurea TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.974
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.974
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.936
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.897
29968.m000644 Ricinus communis 29968.m000644 I 0.897
Pm005894 Prunus mume Pm005894 I 0.885
MDP0000290118 Malus domestica MDP0000290118 I 0.885
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.885
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.859
TCM_011266 Theobroma cacao TCM_011266 I 0.846
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.821
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.821
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I 0.821
Lus10013242.g Linum usitatissimum Lus10013242.g I 0.808
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N 0.795
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.795
PK02661.1 Cannabis sativa PK02661.1 I 0.795
orange1.1g027579m.g Citrus sinensis orange1.1g027579m.g N 0.795
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.795
Cucsa.012070 Cucumis sativus Cucsa.012070 N 0.782
cassava40347.m1 Manihot esculenta cassava40347.m1 N 0.782
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.764
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.764
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.764
AT2G01818 Arabidopsis thaliana AT2G01818 D 0.764
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.764
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.764
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N 0.756
Lus10028998.g Linum usitatissimum Lus10028998.g N 0.745
PGSC0003DMG400029466 Solanum tuberosum PGSC0003DMG400029466 N 0.744
Solyc04g008090.2 Solanum lycopersicum Solyc04g008090.2 N 0.744
Cla005897 Citrullus lanatus Cla005897 N 0.744
Bo7g078820 Brassica oleracea Bo7g078820 I 0.731
Lus10003680.g Linum usitatissimum Lus10003680.g N 0.727
Bo2g134600 Brassica oleracea Bo2g134600 I 0.709
mgf026615m Mimulus guttatus mgf026615m N 0.705