PK02661.1 (Cannabis sativa)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 PK02661.1 T316201_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G01818
M07247_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT2G01818_col_a
0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK02661.1 PLATZ 102 179

Links

Other PLATZ family TFs
Other Cannabis sativa TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29968.m000644 Ricinus communis 29968.m000644 I 0.833
AT2G01818 Arabidopsis thaliana AT2G01818 D 0.705
Bo2g134600 Brassica oleracea Bo2g134600 I 0.756
Bo7g078820 Brassica oleracea Bo7g078820 I 0.756
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.744
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.731
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.731
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.846
cassava40347.m1 Manihot esculenta cassava40347.m1 N 0.833
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N 0.833
Cla005897 Citrullus lanatus Cla005897 N 0.756
Cucsa.012070 Cucumis sativus Cucsa.012070 N 0.756
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I 0.833
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.821
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.744
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.821
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.782
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.808
Lus10013242.g Linum usitatissimum Lus10013242.g I 0.744
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.744
MDP0000290118 Malus domestica MDP0000290118 I 0.821
mgf026615m Mimulus guttatus mgf026615m N 0.718
orange1.1g027579m.g Citrus sinensis orange1.1g027579m.g N 0.833
PGSC0003DMG400029466 Solanum tuberosum PGSC0003DMG400029466 N 0.705
Pm005894 Prunus mume Pm005894 I 0.808
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.808
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.795
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.808
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I 0.795
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.769
Solyc04g008090.2 Solanum lycopersicum Solyc04g008090.2 N 0.705
TCM_011266 Theobroma cacao TCM_011266 I 0.808
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.744
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N 0.795