genemark-nMf.1.1.scaf22092-processed-gene-0.1 (Meloidogyne floridensis)
POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00157 (Pou) IPR000327 genemark-nMf.1.1.scaf22092-processed-gene-0.1 T316336_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Pou2f1
M00803_2.00
Mus musculus
NHATWWNHNN

NNDNWWATDN
PBM
Weirauch et al.(2013)
pTH4325
0.774 0.774
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf22092-processed-gene-0.1-mRNA-1 POU 1 53

Links

Other POU family TFs
Other Meloidogyne floridensis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
maker-nMf.1.1.scaf02834-augustus-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf02834-augustus-gene-0.10 I 1.000
snap_masked-nMf.1.1.scaf03688-processed-gene-0.4 Meloidogyne floridensis snap_masked-nMf.1.1.scaf03688-processed-gene-0.4 N 0.981
L892_g6561 Steinernema scapterisci L892_g6561 I 0.849
L889_g16900 Steinernema feltiae L889_g16900 I 0.849
L898_g22690 Steinernema monticolum L898_g22690 I 0.849
L596_g16531 Steinernema carpocapsae L596_g16531 I 0.849
L893_g4672 Steinernema glaseri L893_g4672 I 0.849
GPUH_0002653201 Gongylonema pulchrum GPUH_0002653201 I 0.811
POU2F2 Pteropus vampyrus ENSPVAG00000010621 I 0.774
ENSDNOG00000046180 Dasypus novemcinctus ENSDNOG00000046180 I 0.774
TTRE_0000958901 Trichuris trichiura TTRE_0000958901 I 0.717
ENSXMAG00000019380 Xiphophorus maculatus ENSXMAG00000019380 I 0.717