CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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SBAD_0000068201
(
Soboliphyme baturini
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
SBAD_0000068201
T316786_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pros-1
M00708_2.00
Caenorhabditis elegans
NNBRAGRHDN
NHDYCTYVNN
PBM
Narasimhan et al.(2015)
pTH9164
0.860
0.860
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SBAD_0000068201-mRNA-1
Prospero
51
100
TLTPMHLRKAKLMFFFSRYPSSSLLKAFFPDIRFNKNNTAQLVKWFSNFR
Links
Other
Prospero
family TFs
Other
Soboliphyme baturini
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy