SU7_2890 (Saccharomyces arboricola)
Rap1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09197 (Rap1-DNA-bind) IPR015280 SU7_2890 T316915_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP1
M00378_2.00
Saccharomyces cerevisiae
RGRTGKAYGG

CCRTMCAYCY
PBM
Berger et al.(2006)
Rap1
0.835 0.835
RAP1
M01564_2.00
Saccharomyces cerevisiae
NGGTGYVNDD

HHNBRCACCN
PBM
Zhu et al.(2009)
Rap1
0.835 0.835
RAP1
M07493_2.00
Saccharomyces cerevisiae
TGTWYGGGTG

CACCCRWACA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0359.1
0.835 0.835
RAP1
M07556_2.00
Saccharomyces cerevisiae
RTGYRYGGGTG

CACCCRYRCAY
ChIP-exo
Rhee et al.(2011)
Rap1_1
0.835 0.835
RAP1
M07557_2.00
Saccharomyces cerevisiae
GTGTGKGTGTG

CACACMCACAC
ChIP-exo
Rhee et al.(2011)
Rap1_2
0.835 0.835
RAP1
M07558_2.00
Saccharomyces cerevisiae
GGTGTGGTGTG

CACACCACACC
ChIP-exo
Rhee et al.(2011)
Rap1_3
0.835 0.835
RAP1
M08599_2.00
Saccharomyces cerevisiae
DRTGTRYGGGTKY

RMACCCRYACAYH
Misc
DeBoer et al.(2011)
YNL216W_254
0.835 0.835
RAP1
M11214_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RAP1_03
0.835 0.835
RAP1
M11215_2.00
Saccharomyces cerevisiae
RRTGTMTGGGTKYD

HRMACCCAKACAYY
Transfac
Matys et al.(2006)
F$RAP1_C
0.835 0.835
RAP1
M11216_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RAP1_Q6
0.835 0.835
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS42089 Rap1 300 420
EJS42089 Rap1 444 575

Links

Other Rap1 family TFs
Other Saccharomyces arboricola TFs

Invalid Input OrderBy

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action