RELB (Callithrix jacchus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSCJAG00000012991 T317070_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RELB
M08161_2.00
Homo sapiens
NNATTCCCCNN

NNGGGGAATNN
ChIP-seq
Mathelier et al.(2014)
MA1117.1
0.988 0.988
RELB
M09347_2.00
Homo sapiens
VGGGRMTTTSMH

DKSAAAKYCCCB
Misc
Kulakovskiy et al.(2013)
RELB_HUMAN.H11MO.0.C
0.988 0.988
Relb
M09352_2.00
Mus musculus
VGGGRMTTTSMH

DKSAAAKYCCCB
Misc
Kulakovskiy et al.(2013)
RELB_MOUSE.H11MO.0.C
0.977 0.977
RELB
M11227_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELBP50_Q3
0.988 0.988
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000023871 Rel 126 294
ENSCJAP00000043075 Rel 126 168

Links

Other Rel family TFs
Other Callithrix jacchus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA031610 Oryza indica BGIOSGA031610 N 0.000
GRMZM2G392823 Zea mays GRMZM2G392823 N 0.000
MLOC_72262 Hordeum vulgare MLOC_72262 N 0.000
OB10G21860 Oryza brachyantha OB10G21860 N 0.000
OBART10G14710 Oryza barthii OBART10G14710 N 0.000
OGLUM10G14600 Oryza glumaepatula OGLUM10G14600 N 0.000
OLONG_004015 Oryza longistaminata OLONG_004015 N 0.000
OMERI10G11440 Oryza meridionalis OMERI10G11440 N 0.000
ONIVA10G16530 Oryza nivara ONIVA10G16530 N 0.000
ORUFI10G15680 Oryza rufipogon ORUFI10G15680 N 0.000
Pavir.Ia01569 Panicum virgatum Pavir.Ia01569 N 0.000
Pavir.Ib03599 Panicum virgatum Pavir.Ib03599 N 0.000
Pavir.J36491 Panicum virgatum Pavir.J36491 N 0.000
Sb01g018060 Sorghum bicolor Sb01g018060 N 0.000
Si037244m.g Setaria italica Si037244m.g N 0.000
Traes_1AL_28010F812 Triticum aestivum Traes_1AL_28010F812 N 0.000
Traes_1BL_C664E8E1E Triticum aestivum Traes_1BL_C664E8E1E N 0.000
Traes_1DL_2714E3604 Triticum aestivum Traes_1DL_2714E3604 N 0.000