CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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REL
(
Homo sapiens
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSG00000162924
T317174_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
This gene encodes a protein that belongs to the Rel homology domain/immunoglobulin-like fold, plexin, transcription factor (RHD/IPT) family. Members of this family regulate genes involved in apoptosis, inflammation, the immune response, and oncogenic processes. This proto-oncogene plays a role in the survival and proliferation of B lymphocytes. Mutation or amplification of this gene is associated with B-cell lymphomas, including Hodgkin's lymphoma. Single nucleotide polymorphisms in this gene are associated with susceptibility to ulcerative colitis and rheumatoid arthritis. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Apr 2014]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
(Direct)
(Direct)
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
(Direct)
(Direct)
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
(Direct)
(Direct)
REL
M11236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.935
0.935
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000295025
Rel
10
178
IEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDN
ENSP00000377989
Rel
10
178
IEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDN
Links
Other
Rel
family TFs
Other
Homo sapiens
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSNLEG00000009519
Nomascus leucogenys
ENSNLEG00000009519
I
1.000
REL
Pan troglodytes
ENSPTRG00000011949
I
1.000
ENSPPYG00000012391
Pongo abelii
ENSPPYG00000012391
I
1.000
REL
Gorilla gorilla
ENSGGOG00000024826
I
0.994
REL
Macaca mulatta
ENSMMUG00000010834
I
0.994
ENSMMUP00000014199
Macaca fascicularis
ENSMMUP00000014199
I
0.994
ENSPANG00000006148
Papio anubis
ENSPANG00000006148
I
0.994
ENSTSYG00000012918
Tarsius syrichta
ENSTSYG00000012918
I
0.982
REL
Otolemur garnettii
ENSOGAG00000013722
I
0.982
REL
Callithrix jacchus
ENSCJAG00000008975
I
0.982
REL
Canis familiaris
ENSCAFG00000002981
I
0.976
ENSAMEG00000018236
Ailuropoda melanoleuca
ENSAMEG00000018236
I
0.976
REL
Felis catus
ENSFCAG00000008018
I
0.976
REL
Oryctolagus cuniculus
ENSOCUG00000004968
I
0.970
ENSOARG00000001457
Ovis aries
ENSOARG00000001457
I
0.959
REL
Equus caballus
ENSECAG00000003277
I
0.959
ENSMPUG00000005180
Mustela putorius furo
ENSMPUG00000005180
I
0.953
REL
Vicugna pacos
ENSVPAG00000000493
I
0.953
ENSP00000295025-D1
Bos grunniens
ENSP00000295025-D1
I
0.953
REL
Bos taurus
ENSBTAG00000015386
I
0.953
ENSETEG00000002607
Echinops telfairi
ENSETEG00000002607
I
0.952
Rel
Rattus norvegicus
ENSRNOG00000054437
I
0.947
ENSSTOG00000005785
Ictidomys tridecemlineatus
ENSSTOG00000005785
I
0.947
REL
Loxodonta africana
ENSLAFG00000013507
I
0.947
REL
Choloepus hoffmanni
ENSCHOG00000010935
I
0.942
REL
Cavia porcellus
ENSCPOG00000011659
I
0.941
REL
Myotis lucifugus
ENSMLUG00000007454
I
0.941
Myotis_brandtii_REL_10034307
Myotis brandtii
Myotis_brandtii_REL_10034307
I
0.937
REL
Sorex araneus
ENSSARG00000011809
I
0.935
Rel
Mus musculus
ENSMUSG00000020275
D
0.935
REL
Monodelphis domestica
ENSMODG00000002172
I
0.917
REL
Ornithorhynchus anatinus
ENSOANG00000012405
I
0.905
ENSSHAG00000014405
Sarcophilus harrisii
ENSSHAG00000014405
I
0.905
REL
Pteropus vampyrus
ENSPVAG00000000364
I
0.905
REL
Sus scrofa
ENSSSCG00000008388
I
0.876
Brh_R000963
Buceros rhinoceros
Brh_R000963
I
0.817
REL
Meleagris gallopavo
ENSMGAG00000001721
I
0.811
REL
Gallus gallus
ENSGALG00000007845
I
0.811
ENSFALG00000011066
Ficedula albicollis
ENSFALG00000011066
I
0.805
Afo_R011359
Aptenodytes forsteri
Afo_R011359
I
0.805
Aan_R006375
Calypte anna
Aan_R006375
I
0.805
Gfo_R008165
Geospiza fortis
Gfo_R008165
I
0.799
REL
Taeniopygia guttata
ENSTGUG00000006743
I
0.799
rel
Xenopus tropicalis
XB-GENE-993262
I
0.793
rel.L
Xenopus laevis
XB-GENE-993266
I
0.787
rel.S
Xenopus laevis
XB-GENE-17342653
I
0.781
ENSLACG00000008544
Latimeria chalumnae
ENSLACG00000008544
I
0.781
Pvit_04537
Pogona vitticeps
Pvit_04537
I
0.781
ENSAPLG00000006795
Anas platyrhynchos
ENSAPLG00000006795
I
0.775
ENSPSIG00000013860
Pelodiscus sinensis
ENSPSIG00000013860
I
0.775
Tal_R011178
Tyto alba
Tal_R011178
I
0.760
ENSLOCG00000016127
Lepisosteus oculatus
ENSLOCG00000016127
I
0.757
ENSCSAG00000014415
Chlorocebus sabaeus
ENSCSAG00000014415
I
0.757
Cmyd_10008594
Chelonia mydas
Cmyd_10008594
I
0.757
ENSONIG00000002983
Oreochromis niloticus
ENSONIG00000002983
I
0.751
rel
Danio rerio
ENSDARG00000055276
I
0.746
ENSAMXG00000004647
Astyanax mexicanus
ENSAMXG00000004647
I
0.728
ENSXMAG00000007379
Xiphophorus maculatus
ENSXMAG00000007379
I
0.728
ENSPFOG00000013038
Poecilia formosa
ENSPFOG00000013038
I
0.728
ENSTRUG00000006394
Takifugu rubripes
ENSTRUG00000006394
I
0.722
REL
Anolis carolinensis
ENSACAG00000003030
I
0.722
rel
Oryzias latipes
ENSORLG00000001586
I
0.710