ENSLACG00000002751 (Latimeria chalumnae)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSLACG00000002751 T317219_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFKB1
M03448_2.00 		Homo sapiens
MGGGGAWTCCCCT
AGGGGAWTCCCCK		 SELEX
Jolma et al.(2013)
NFKB1_1 		0.793 0.793
NFKB1
M05887_2.00 		Homo sapiens
NGGKRNTYYCCCN
NGGGRRANYMCCN		 SMiLE-seq
Isakova et al.(2017)
NFKB1 		0.793 0.793
NFKB1
M09348_2.00 		Homo sapiens
HYTTCCCY
RGGGAARD		 Misc
Kulakovskiy et al.(2013)
NFKB1_HUMAN.H11MO.0.A 		0.793 0.793
NFKB1
M11228_2.00 		Homo sapiens
GGGGATYCCC
GGGRATCCCC		 Transfac
Matys et al.(2006)
V$NFKAPPAB50_01 		0.793 0.793
NFKB1
M11229_2.00 		Homo sapiens
NGGGAHTYYCCM
KGGRRADTCCCN		 Transfac
Matys et al.(2006)
V$NFKB_C 		0.793 0.793
NFKB1
M11230_2.00 		Homo sapiens
DKGGGAMTTYCCNN
NNGGRAAKTCCCMH		 Transfac
Matys et al.(2006)
V$NFKB_Q6 		0.793 0.793
NFKB1
M11231_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P50_Q6 		0.793 0.793
Nfkb1
M09358_2.00 		Mus musculus
GGGRNTTYCCC
GGGRAANYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB1_MOUSE.H11MO.0.A 		0.787 0.787
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000003071 Rel 33 232

Links

Other Rel family TFs
Other Latimeria chalumnae TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NFKB2 Homo sapiens ENSG00000077150 D 0.931
NFKB1 Sus scrofa ENSSSCG00000030957 I 0.929
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I 0.851
NFKB1 Homo sapiens ENSG00000109320 D 0.830
NFKB1 Gallus gallus ENSGALG00000012304 I 0.811
NFKB1 Meleagris gallopavo ENSMGAG00000011299 I 0.811
Brh_R011794 Buceros rhinoceros Brh_R011794 I 0.805
ENSPSIG00000008515 Pelodiscus sinensis ENSPSIG00000008515 I 0.799
NFKB1 Taeniopygia guttata ENSTGUG00000003595 I 0.799
Aan_R012729 Calypte anna Aan_R012729 I 0.799
ENSAPLG00000013878 Anas platyrhynchos ENSAPLG00000013878 I 0.799
ENSFALG00000008136 Ficedula albicollis ENSFALG00000008136 I 0.799
Gfo_R000994 Geospiza fortis Gfo_R000994 I 0.799
Tal_R004861 Tyto alba Tal_R004861 I 0.799
Afo_R015662 Aptenodytes forsteri Afo_R015662 I 0.799
Nfkb1 Mus musculus ENSMUSG00000028163 D 0.796
ENSNLEG00000013325 Nomascus leucogenys ENSNLEG00000013325 I 0.793
ENSAMEG00000008882 Ailuropoda melanoleuca ENSAMEG00000008882 I 0.793
NFKB1 Otolemur garnettii ENSOGAG00000012840 I 0.793
NFKB1 Vicugna pacos ENSVPAG00000000280 I 0.793
ENSPPYG00000014965 Pongo abelii ENSPPYG00000014965 I 0.793
ENSSHAG00000007374 Sarcophilus harrisii ENSSHAG00000007374 I 0.793
ENSSTOG00000011445 Ictidomys tridecemlineatus ENSSTOG00000011445 I 0.793
Nfkb1 Rattus norvegicus ENSRNOG00000023258 I 0.793
NFKB1 Pteropus vampyrus ENSPVAG00000002722 I 0.793
NFKB1 Tursiops truncatus ENSTTRG00000010852 I 0.793
NFKB1 Pan troglodytes ENSPTRG00000016320 I 0.793
ENSPANG00000023882 Papio anubis ENSPANG00000023882 I 0.793
NFKB1 Monodelphis domestica ENSMODG00000020672 I 0.793
NFKB1 Felis catus ENSFCAG00000007557 I 0.793
NFKB1 Callithrix jacchus ENSCJAG00000015382 I 0.793
NFKB1 Canis familiaris ENSCAFG00000010730 I 0.793
ENSP00000226574 Macaca fascicularis ENSP00000226574 I 0.793
Nfkb1 Dipodomys ordii ENSDORG00000007447 I 0.793
ENSCSAG00000004049 Chlorocebus sabaeus ENSCSAG00000004049 I 0.793
NFKB1 Dasypus novemcinctus ENSDNOG00000006855 I 0.793
ENSMPUG00000009413 Mustela putorius furo ENSMPUG00000009413 I 0.793
NFKB1 Gorilla gorilla ENSGGOG00000009071 I 0.793
NFKB1 Myotis lucifugus ENSMLUG00000005986 I 0.793
NFKB1 Macaca mulatta ENSMMUG00000003736 I 0.793
Myotis_brandtii_NFKB1_10013135 Myotis brandtii Myotis_brandtii_NFKB1_10013135 I 0.793
NFKB1 Tupaia belangeri ENSTBEG00000003520 I 0.793
ENSMEUG00000001334 Macropus eugenii ENSMEUG00000001334 I 0.793
NFKB1 Loxodonta africana ENSLAFG00000009344 I 0.793
NFKB1 Bos taurus ENSBTAG00000020270 I 0.787
ENSBTAP00000027016-D1 Bos grunniens ENSBTAP00000027016-D1 I 0.787
ENSOARG00000012718 Ovis aries ENSOARG00000012718 I 0.787
Alligator_sinensis_CCG005309.1 Alligator sinensis Alligator_sinensis_CCG005309.1 I 0.781
NFKB1 Oryctolagus cuniculus ENSOCUG00000021712 I 0.781
NFKB1 Cavia porcellus ENSCPOG00000007789 I 0.781
NFKB1 Ochotona princeps ENSOPRG00000005212 I 0.781
Pvit_05196 Pogona vitticeps Pvit_05196 I 0.775
NFKB1 Procavia capensis ENSPCAG00000008172 I 0.769
nfkb1 Danio rerio ENSDARG00000105261 I 0.757
ENSOANG00000022123 Ornithorhynchus anatinus ENSOANG00000022123 I 0.753
ENSLOCG00000012080 Lepisosteus oculatus ENSLOCG00000012080 I 0.746
NFKB1 Equus caballus ENSECAG00000015042 I 0.740
Ogr10707 Ophisaurus gracilis Ogr10707 I 0.734
ENSAMXG00000003341 Astyanax mexicanus ENSAMXG00000003341 I 0.734
nfkb1 Xenopus tropicalis XB-GENE-985746 I 0.722
ENSGMOG00000007506 Gadus morhua ENSGMOG00000007506 N 0.722
ENSXMAG00000015369 Xiphophorus maculatus ENSXMAG00000015369 I 0.722
NFKB1 Gasterosteus aculeatus ENSGACG00000016876 I 0.716
ENSONIG00000004349 Oreochromis niloticus ENSONIG00000004349 I 0.716
ENSPFOG00000016918 Poecilia formosa ENSPFOG00000016918 I 0.716
nfkb1.L Xenopus laevis XB-GENE-985749 I 0.704
NFKB1 Tetraodon nigroviridis ENSTNIG00000002693 N 0.704