CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000016918
(
Poecilia formosa
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSPFOG00000016918
T317426_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NFKB1
M03448_2.00
Homo sapiens
MGGGGAWTCCCCT
AGGGGAWTCCCCK
SELEX
Jolma et al.(2013)
NFKB1_1
0.716
0.716
NFKB1
M05887_2.00
Homo sapiens
NGGKRNTYYCCCN
NGGGRRANYMCCN
SMiLE-seq
Isakova et al.(2017)
NFKB1
0.716
0.716
NFKB1
M09348_2.00
Homo sapiens
HYTTCCCY
RGGGAARD
Misc
Kulakovskiy et al.(2013)
NFKB1_HUMAN.H11MO.0.A
0.716
0.716
NFKB1
M11228_2.00
Homo sapiens
GGGGATYCCC
GGGRATCCCC
Transfac
Matys et al.(2006)
V$NFKAPPAB50_01
0.716
0.716
NFKB1
M11229_2.00
Homo sapiens
NGGGAHTYYCCM
KGGRRADTCCCN
Transfac
Matys et al.(2006)
V$NFKB_C
0.716
0.716
NFKB1
M11230_2.00
Homo sapiens
DKGGGAMTTYCCNN
NNGGRAAKTCCCMH
Transfac
Matys et al.(2006)
V$NFKB_Q6
0.716
0.716
NFKB1
M11231_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P50_Q6
0.716
0.716
Nfkb1
M09358_2.00
Mus musculus
GGGRNTTYCCC
GGGRAANYCCC
Misc
Kulakovskiy et al.(2013)
NFKB1_MOUSE.H11MO.0.A
0.710
0.710
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000017056
Rel
46
245
LQILEQPKQRGFRFRYGCEGPSHGGLPGASSEKNRKTYPTVKICNYQGQARVVVQLVTALTQLPQLHAHSLVGKQCDKGICIADLQSKDSTISFPNLGILHVTKKNVAKTLEERMVEAFRMGYNCGVAIHPEVDALQGEVRVPRELSDHQRSMISSAAASQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSEPIYDS
ENSPFOP00000030251
Rel
12
211
LQILEQPKQRGFRFRYGCEGPSHGGLPGASSEKNRKTYPTVKICNYQGQARVVVQLVTALTQLPQLHAHSLVGKQCDKGICIADLQSKDSTISFPNLGILHVTKKNVAKTLEERMVEAFRMGYNCGVAIHPEVDALQGEVRVPRELSDHQRSMISSAAASQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSEPIYDS
Links
Other
Rel
family TFs
Other
Poecilia formosa
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSXMAG00000015369
Xiphophorus maculatus
ENSXMAG00000015369
I
0.988
ENSONIG00000004349
Oreochromis niloticus
ENSONIG00000004349
I
0.929
NFKB1
Gasterosteus aculeatus
ENSGACG00000016876
I
0.911
NFKB1
Sus scrofa
ENSSSCG00000030957
I
0.905
NFKB1
Tetraodon nigroviridis
ENSTNIG00000002693
N
0.876
nfkb1
Danio rerio
ENSDARG00000105261
I
0.864
ENSLOCG00000012080
Lepisosteus oculatus
ENSLOCG00000012080
I
0.852
ENSGMOG00000007506
Gadus morhua
ENSGMOG00000007506
N
0.846
ENSAMXG00000003341
Astyanax mexicanus
ENSAMXG00000003341
I
0.822
ENSOANG00000028755
Ornithorhynchus anatinus
ENSOANG00000028755
I
0.787
NFKB1
Ochotona princeps
ENSOPRG00000005212
I
0.716
NFKB1
Oryctolagus cuniculus
ENSOCUG00000021712
I
0.716
NFKB1
Otolemur garnettii
ENSOGAG00000012840
I
0.716
NFKB1
Pan troglodytes
ENSPTRG00000016320
I
0.716
ENSSTOG00000011445
Ictidomys tridecemlineatus
ENSSTOG00000011445
I
0.716
NFKB1
Tupaia belangeri
ENSTBEG00000003520
I
0.716
NFKB1
Tursiops truncatus
ENSTTRG00000010852
I
0.716
ENSSHAG00000007374
Sarcophilus harrisii
ENSSHAG00000007374
I
0.716
Nfkb1
Rattus norvegicus
ENSRNOG00000023258
I
0.716
ENSNLEG00000013325
Nomascus leucogenys
ENSNLEG00000013325
I
0.716
NFKB1
Pteropus vampyrus
ENSPVAG00000002722
I
0.716
ENSPPYG00000014965
Pongo abelii
ENSPPYG00000014965
I
0.716
NFKB1
Monodelphis domestica
ENSMODG00000020672
I
0.716
NFKB1
Dasypus novemcinctus
ENSDNOG00000006855
I
0.716
ENSP00000226574
Macaca fascicularis
ENSP00000226574
I
0.716
NFKB1
Felis catus
ENSFCAG00000007557
I
0.716
ENSCSAG00000004049
Chlorocebus sabaeus
ENSCSAG00000004049
I
0.716
NFKB1
Cavia porcellus
ENSCPOG00000007789
I
0.716
Myotis_brandtii_NFKB1_10013135
Myotis brandtii
Myotis_brandtii_NFKB1_10013135
I
0.716
NFKB1
Canis familiaris
ENSCAFG00000010730
I
0.716
NFKB1
Callithrix jacchus
ENSCJAG00000015382
I
0.716
NFKB1
Homo sapiens
ENSG00000109320
D
0.716
NFKB1
Gorilla gorilla
ENSGGOG00000009071
I
0.716
NFKB1
Macaca mulatta
ENSMMUG00000003736
I
0.716
NFKB1
Vicugna pacos
ENSVPAG00000000280
I
0.716
ENSMPUG00000009413
Mustela putorius furo
ENSMPUG00000009413
I
0.716
ENSAMEG00000008882
Ailuropoda melanoleuca
ENSAMEG00000008882
I
0.716
NFKB1
Myotis lucifugus
ENSMLUG00000005986
I
0.716
ENSLACG00000002751
Latimeria chalumnae
ENSLACG00000002751
I
0.716
NFKB1
Loxodonta africana
ENSLAFG00000009344
I
0.716
ENSMEUG00000001334
Macropus eugenii
ENSMEUG00000001334
I
0.716
ENSBTAP00000027016-D1
Bos grunniens
ENSBTAP00000027016-D1
I
0.710
Nfkb1
Mus musculus
ENSMUSG00000028163
D
0.710
NFKB1
Bos taurus
ENSBTAG00000020270
I
0.710
ENSOARG00000012718
Ovis aries
ENSOARG00000012718
I
0.710
ENSPANG00000023882
Papio anubis
ENSPANG00000023882
I
0.704
Nfkb1
Dipodomys ordii
ENSDORG00000007447
I
0.704