ENSPPYG00000014965 (Pongo abelii)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSPPYG00000014965 T317446_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NFKB1
M03448_2.00
Homo sapiens
MGGGGAWTCCCCT

AGGGGAWTCCCCK
SELEX
Jolma et al.(2013)
NFKB1_1
0.994 0.994
NFKB1
M05887_2.00
Homo sapiens
NGGKRNTYYCCCN

NGGGRRANYMCCN
SMiLE-seq
Isakova et al.(2017)
NFKB1
0.994 0.994
NFKB1
M09348_2.00
Homo sapiens
HYTTCCCY

RGGGAARD
Misc
Kulakovskiy et al.(2013)
NFKB1_HUMAN.H11MO.0.A
0.994 0.994
NFKB1
M11228_2.00
Homo sapiens
GGGGATYCCC

GGGRATCCCC
Transfac
Matys et al.(2006)
V$NFKAPPAB50_01
0.994 0.994
NFKB1
M11229_2.00
Homo sapiens
NGGGAHTYYCCM

KGGRRADTCCCN
Transfac
Matys et al.(2006)
V$NFKB_C
0.994 0.994
NFKB1
M11230_2.00
Homo sapiens
DKGGGAMTTYCCNN

NNGGRAAKTCCCMH
Transfac
Matys et al.(2006)
V$NFKB_Q6
0.994 0.994
NFKB1
M11231_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P50_Q6
0.994 0.994
Nfkb1
M09358_2.00
Mus musculus
GGGRNTTYCCC

GGGRAANYCCC
Misc
Kulakovskiy et al.(2013)
NFKB1_MOUSE.H11MO.0.A
0.976 0.976
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000016712 Rel 45 243

Links

Other Rel family TFs
Other Pongo abelii TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo01093s010 Brassica oleracea Bo01093s010 N 0.000
Bo01167s020 Brassica oleracea Bo01167s020 N 0.000
Bo08089s010 Brassica oleracea Bo08089s010 N 0.000
Bo1g014460 Brassica oleracea Bo1g014460 N 0.000
Bo1g017840 Brassica oleracea Bo1g017840 N 0.000
Bo1g053550 Brassica oleracea Bo1g053550 N 0.000
Bo2g100490 Brassica oleracea Bo2g100490 N 0.000
Bo2g134150 Brassica oleracea Bo2g134150 N 0.000
Bo2g138760 Brassica oleracea Bo2g138760 N 0.000
Bo3g030260 Brassica oleracea Bo3g030260 N 0.000
Bo3g078620 Brassica oleracea Bo3g078620 N 0.000
Bo3g091380 Brassica oleracea Bo3g091380 N 0.000
Bo3g155400 Brassica oleracea Bo3g155400 N 0.000
Bo4g117120 Brassica oleracea Bo4g117120 N 0.000
Bo4g154600 Brassica oleracea Bo4g154600 N 0.000
Bo4g162580 Brassica oleracea Bo4g162580 N 0.000
Bo4g173170 Brassica oleracea Bo4g173170 N 0.000
Bo4g178110 Brassica oleracea Bo4g178110 N 0.000
Bo5g034250 Brassica oleracea Bo5g034250 N 0.000
Bo6g008210 Brassica oleracea Bo6g008210 N 0.000
Bo6g087610 Brassica oleracea Bo6g087610 N 0.000
Bo6g099260 Brassica oleracea Bo6g099260 N 0.000
Bo7g016140 Brassica oleracea Bo7g016140 N 0.000
Bo7g064790 Brassica oleracea Bo7g064790 N 0.000
Bo7g065750 Brassica oleracea Bo7g065750 N 0.000
Bo7g067460 Brassica oleracea Bo7g067460 N 0.000
Bo7g093290 Brassica oleracea Bo7g093290 N 0.000
Bo7g099300 Brassica oleracea Bo7g099300 N 0.000
Bo7g101500 Brassica oleracea Bo7g101500 N 0.000
Bo8g066500 Brassica oleracea Bo8g066500 N 0.000
Bo9g014990 Brassica oleracea Bo9g014990 N 0.000
Bo9g140760 Brassica oleracea Bo9g140760 N 0.000
Bo9g163500 Brassica oleracea Bo9g163500 N 0.000
Bostr.0597s0093 Boechera stricta Bostr.0597s0093 N 0.000
Bostr.12302s0059 Boechera stricta Bostr.12302s0059 N 0.000
Bostr.13404s0068 Boechera stricta Bostr.13404s0068 N 0.000
Bostr.19424s0811 Boechera stricta Bostr.19424s0811 N 0.000
Bostr.7867s0394 Boechera stricta Bostr.7867s0394 N 0.000