Nfkb1 (Rattus norvegicus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSRNOG00000023258 T317480_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NFKB1
M03448_2.00
Homo sapiens
MGGGGAWTCCCCT

AGGGGAWTCCCCK
SELEX
Jolma et al.(2013)
NFKB1_1
0.994 0.994
NFKB1
M05887_2.00
Homo sapiens
NGGKRNTYYCCCN

NGGGRRANYMCCN
SMiLE-seq
Isakova et al.(2017)
NFKB1
0.994 0.994
NFKB1
M09348_2.00
Homo sapiens
HYTTCCCY

RGGGAARD
Misc
Kulakovskiy et al.(2013)
NFKB1_HUMAN.H11MO.0.A
0.994 0.994
NFKB1
M11228_2.00
Homo sapiens
GGGGATYCCC

GGGRATCCCC
Transfac
Matys et al.(2006)
V$NFKAPPAB50_01
0.994 0.994
NFKB1
M11229_2.00
Homo sapiens
NGGGAHTYYCCM

KGGRRADTCCCN
Transfac
Matys et al.(2006)
V$NFKB_C
0.994 0.994
NFKB1
M11230_2.00
Homo sapiens
DKGGGAMTTYCCNN

NNGGRAAKTCCCMH
Transfac
Matys et al.(2006)
V$NFKB_Q6
0.994 0.994
NFKB1
M11231_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P50_Q6
0.994 0.994
Nfkb1
M09358_2.00
Mus musculus
GGGRNTTYCCC

GGGRAANYCCC
Misc
Kulakovskiy et al.(2013)
NFKB1_MOUSE.H11MO.0.A
0.988 0.988
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000028944 Rel 43 241

Links

Other Rel family TFs
Other Rattus norvegicus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NFKB1 Pteropus vampyrus ENSPVAG00000002722 I 1.000
ENSAMEG00000008882 Ailuropoda melanoleuca ENSAMEG00000008882 I 1.000
ENSMPUG00000009413 Mustela putorius furo ENSMPUG00000009413 I 1.000
NFKB1 Homo sapiens ENSG00000109320 D 1.000
NFKB1 Tupaia belangeri ENSTBEG00000003520 I 1.000
NFKB1 Sus scrofa ENSSSCG00000030957 I 1.000
NFKB1 Tursiops truncatus ENSTTRG00000010852 I 1.000
NFKB1 Canis familiaris ENSCAFG00000010730 I 1.000
NFKB1 Vicugna pacos ENSVPAG00000000280 I 1.000
NFKB1 Macaca mulatta ENSMMUG00000003736 I 0.994
ENSP00000226574 Macaca fascicularis ENSP00000226574 I 0.994
NFKB1 Loxodonta africana ENSLAFG00000009344 I 0.994
ENSBTAP00000027016-D1 Bos grunniens ENSBTAP00000027016-D1 I 0.994
ENSNLEG00000013325 Nomascus leucogenys ENSNLEG00000013325 I 0.994
NFKB1 Pan troglodytes ENSPTRG00000016320 I 0.994
ENSSTOG00000011445 Ictidomys tridecemlineatus ENSSTOG00000011445 I 0.994
NFKB1 Gorilla gorilla ENSGGOG00000009071 I 0.994
ENSOARG00000012718 Ovis aries ENSOARG00000012718 I 0.994
NFKB1 Bos taurus ENSBTAG00000020270 I 0.994
NFKB1 Dasypus novemcinctus ENSDNOG00000006855 I 0.994
ENSCSAG00000004049 Chlorocebus sabaeus ENSCSAG00000004049 I 0.994
NFKB1 Felis catus ENSFCAG00000007557 I 0.994
NFKB1 Callithrix jacchus ENSCJAG00000015382 I 0.988
Nfkb1 Mus musculus ENSMUSG00000028163 D 0.988
NFKB1 Otolemur garnettii ENSOGAG00000012840 I 0.988
ENSPPYG00000014965 Pongo abelii ENSPPYG00000014965 I 0.988
Nfkb1 Dipodomys ordii ENSDORG00000007447 I 0.982
NFKB1 Cavia porcellus ENSCPOG00000007789 I 0.982
ENSSHAG00000007374 Sarcophilus harrisii ENSSHAG00000007374 I 0.982
NFKB1 Myotis lucifugus ENSMLUG00000005986 I 0.976
Myotis_brandtii_NFKB1_10013135 Myotis brandtii Myotis_brandtii_NFKB1_10013135 I 0.976
NFKB1 Ochotona princeps ENSOPRG00000005212 I 0.976
ENSMEUG00000001334 Macropus eugenii ENSMEUG00000001334 I 0.976
NFKB1 Oryctolagus cuniculus ENSOCUG00000021712 I 0.976
NFKB1 Monodelphis domestica ENSMODG00000020672 I 0.976
NFKB1 Procavia capensis ENSPCAG00000008172 I 0.965
ENSPANG00000023882 Papio anubis ENSPANG00000023882 I 0.953
ENSOANG00000022123 Ornithorhynchus anatinus ENSOANG00000022123 I 0.948
NFKB1 Equus caballus ENSECAG00000015042 I 0.923
ENSFALG00000008136 Ficedula albicollis ENSFALG00000008136 I 0.923
NFKB1 Meleagris gallopavo ENSMGAG00000011299 I 0.917
Gfo_R000994 Geospiza fortis Gfo_R000994 I 0.917
ENSAPLG00000013878 Anas platyrhynchos ENSAPLG00000013878 I 0.917
Afo_R015662 Aptenodytes forsteri Afo_R015662 I 0.917
NFKB1 Gallus gallus ENSGALG00000012304 I 0.917
Brh_R011794 Buceros rhinoceros Brh_R011794 I 0.917
Tal_R004861 Tyto alba Tal_R004861 I 0.917
Aan_R012729 Calypte anna Aan_R012729 I 0.911
ENSPSIG00000008515 Pelodiscus sinensis ENSPSIG00000008515 I 0.911
NFKB1 Taeniopygia guttata ENSTGUG00000003595 I 0.911
Alligator_sinensis_CCG005309.1 Alligator sinensis Alligator_sinensis_CCG005309.1 I 0.905
NFKB2 Homo sapiens ENSG00000077150 D 0.897
Pvit_05196 Pogona vitticeps Pvit_05196 I 0.893
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I 0.872
Ogr10707 Ophisaurus gracilis Ogr10707 I 0.852
nfkb1 Xenopus tropicalis XB-GENE-985746 I 0.811
ENSLACG00000002751 Latimeria chalumnae ENSLACG00000002751 I 0.793
nfkb1.L Xenopus laevis XB-GENE-985749 I 0.781
ENSLOCG00000012080 Lepisosteus oculatus ENSLOCG00000012080 I 0.757
nfkb1 Danio rerio ENSDARG00000105261 I 0.734
ENSAMXG00000003341 Astyanax mexicanus ENSAMXG00000003341 I 0.722
ENSXMAG00000015369 Xiphophorus maculatus ENSXMAG00000015369 I 0.716
ENSPFOG00000016918 Poecilia formosa ENSPFOG00000016918 I 0.716
ENSONIG00000004349 Oreochromis niloticus ENSONIG00000004349 I 0.710
NFKB1 Gasterosteus aculeatus ENSGACG00000016876 I 0.704