RELA (Sus scrofa)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSSSCG00000012981 T317508_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Rela
M08039_2.00
Mus musculus
DGGRVTTTCCM

KGGAAABYCCH
ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input_LPSstim
0.958 0.958
Rela
M08038_2.00
Mus musculus
HHYYYCYYNYHYYYNHYYYYCYWNNSYTBY

RVARSNNWRGRRRRDNRRRDRNRRGRRRDD
ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input
0.958 0.958
Rela
M09355_2.00
Mus musculus
KGGRVTTYCCM

KGGRAABYCCM
Misc
Kulakovskiy et al.(2013)
TF65_MOUSE.H11MO.0.A
0.958 0.958
RELA
M02711_2.00
Homo sapiens
SGGRVTTTCC

GGAAABYCCS
SELEX
Mathelier et al.(2014)
MA0107.1
0.940 0.940
RELA
M07999_2.00
Homo sapiens
DGGGRMTTTCCMVN

NBKGGAAAKYCCCH
ChIP-seq
Gerstein et al.(2012)
GM10847_NFKB_Stanford
0.940 0.940
RELA
M08000_2.00
Homo sapiens
NDGGGRMWTTCCHN

NDGGAAWKYCCCHN
ChIP-seq
Gerstein et al.(2012)
GM12878_NFKB_Stanford
0.940 0.940
RELA
M08001_2.00
Homo sapiens
NDGGGRMTTTCCMVN

NBKGGAAAKYCCCHN
ChIP-seq
Gerstein et al.(2012)
GM12891_NFKB_Stanford
0.940 0.940
RELA
M08002_2.00
Homo sapiens
DGGGRHTTTCCMVNN

NNBKGGAAADYCCCH
ChIP-seq
Gerstein et al.(2012)
GM12892_NFKB_Stanford
0.940 0.940
RELA
M08003_2.00
Homo sapiens
DGGGRVTTTCCHVN

NBDGGAAABYCCCH
ChIP-seq
Gerstein et al.(2012)
GM15510_NFKB_Stanford
0.940 0.940
RELA
M08004_2.00
Homo sapiens
NDGGGRMTTTCCMNN

NNKGGAAAKYCCCHN
ChIP-seq
Gerstein et al.(2012)
GM18505_NFKB_Stanford
0.940 0.940
RELA
M08005_2.00
Homo sapiens
NDGGGRHTTTCCMVN

NBKGGAAADYCCCHN
ChIP-seq
Gerstein et al.(2012)
GM18526_NFKB_Stanford
0.940 0.940
RELA
M08006_2.00
Homo sapiens
GGGRVTTTCCM

KGGAAABYCCC
ChIP-seq
Gerstein et al.(2012)
GM18951_NFKB_Stanford
0.940 0.940
RELA
M08007_2.00
Homo sapiens
DGGGRMTTTCCMV

BKGGAAAKYCCCH
ChIP-seq
Gerstein et al.(2012)
GM19099_NFKB_Stanford
0.940 0.940
RELA
M08008_2.00
Homo sapiens
DGGGRMTTTCCMNNN

NNNKGGAAAKYCCCH
ChIP-seq
Gerstein et al.(2012)
GM19193_NFKB_Stanford
0.940 0.940
RELA
M09351_2.00
Homo sapiens
NWGGGRHWTTCCMV

BKGGAAWDYCCCWN
Misc
Kulakovskiy et al.(2013)
TF65_HUMAN.H11MO.0.A
0.940 0.940
RELA
M09626_2.00
Homo sapiens
DGGGRVWTTCCM

KGGAAWBYCCCH
Misc
Heinz et al.(2010)
GM12787-p65_GSE19485
0.940 0.940
RELA
M11237_2.00
Homo sapiens
BGGRVTTTCC

GGAAABYCCV
Transfac
Matys et al.(2006)
V$NFKAPPAB65_01
0.940 0.940
RELA
M11238_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_02
0.940 0.940
RELA
M11239_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_03
0.940 0.940
RELA
M11240_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_04
0.940 0.940
RELA
M11241_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_05
0.940 0.940
RELA
M11242_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_Q6
0.940 0.940
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000013805 Rel 21 186

Links

Other Rel family TFs
Other Sus scrofa TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSCHOG00000004207 Choloepus hoffmanni ENSCHOG00000004207 I 1.000
RELA Tupaia belangeri ENSTBEG00000004751 I 1.000
ENSNLEG00000005769 Nomascus leucogenys ENSNLEG00000005769 I 0.994
RELA Felis catus ENSFCAG00000005696 I 0.994
ENSPPYG00000003053 Pongo abelii ENSPPYG00000003053 I 0.994
RELA Pteropus vampyrus ENSPVAG00000009983 I 0.988
RELA Macaca mulatta ENSMMUG00000007418 I 0.988
ENSP00000384273 Macaca fascicularis ENSP00000384273 I 0.988
ENSAMEG00000017369 Ailuropoda melanoleuca ENSAMEG00000017369 I 0.988
ENSPANG00000013650 Papio anubis ENSPANG00000013650 I 0.988
RELA Loxodonta africana ENSLAFG00000021967 I 0.988
ENSP00000384273-D1 Bos grunniens ENSP00000384273-D1 I 0.988
RELA Equus caballus ENSECAG00000013763 I 0.988
RELA Gorilla gorilla ENSGGOG00000011810 I 0.988
RELA Callithrix jacchus ENSCJAG00000002037 I 0.988
ENSCSAG00000007981 Chlorocebus sabaeus ENSCSAG00000007981 I 0.988
RELA Cavia porcellus ENSCPOG00000020593 I 0.988
RELA Canis familiaris ENSCAFG00000013334 I 0.988
RELA Homo sapiens ENSG00000173039 D 0.988
RELA Bos taurus ENSBTAG00000013895 I 0.988
RELA Microcebus murinus ENSMICG00000008872 I 0.982
RELA Pan troglodytes ENSPTRG00000003889 I 0.982
Rela Rattus norvegicus ENSRNOG00000030888 I 0.982
RELA Dasypus novemcinctus ENSDNOG00000039743 I 0.982
ENSSTOG00000027336 Ictidomys tridecemlineatus ENSSTOG00000027336 I 0.976
RELA Otolemur garnettii ENSOGAG00000014117 I 0.976
RELA Myotis lucifugus ENSMLUG00000008727 I 0.976
RELA Tursiops truncatus ENSTTRG00000002311 I 0.976
Myotis_brandtii_Rela_10030730 Myotis brandtii Myotis_brandtii_Rela_10030730 I 0.976
Rela Mus musculus ENSMUSG00000024927 D 0.958
ENSOARG00000017426 Ovis aries ENSOARG00000017426 I 0.958
RELA Sorex araneus ENSSARG00000003535 I 0.952
ENSMPUG00000011637 Mustela putorius furo ENSMPUG00000011637 I 0.922
RELA Monodelphis domestica ENSMODG00000009603 I 0.910
ENSOANG00000004820 Ornithorhynchus anatinus ENSOANG00000004820 I 0.880
ENSPSIG00000002944 Pelodiscus sinensis ENSPSIG00000002944 I 0.801
Cmyd_10013204 Chelonia mydas Cmyd_10013204 I 0.789
rela.L Xenopus laevis XB-GENE-946512 I 0.771
rela Xenopus tropicalis XB-GENE-946506 I 0.771
Ogr00666 Ophisaurus gracilis Ogr00666 I 0.753
ENSOPRG00000010827 Ochotona princeps ENSOPRG00000010827 I 0.735
Pvit_10466 Pogona vitticeps Pvit_10466 I 0.731